Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_46400 |
Symbol | |
ID | 7763504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4715156 |
End bp | 4716595 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643807485 |
Product | Outer membrane protein |
Protein accession | YP_002801721 |
Protein GI | 226946648 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCC TGCCGTTTCT GCTGTGTTCC GGGCTGGCGC TCGGCGGCTG CAGCATGCTC GGACCGGATT TCGTGGCGCC GGATCGCGGC GCCGAGGAGC GCTGGGAAAG GCCCGCGGAG CCCGGCGTGT ACAGCCGGCC GACCCTCCAG CCACTCGATC CGCAGTGGTG GAAGCTGTTC GACGACCCGC TGCTGTCATC CCTGCAGGAG CGGGCGATGG CCGGCAACCT CGACCTGCGC ACGGCCAGCG CGCGCCTGCG GCAGAGCCGG GCGATCTTCC AGACACTGAG CGGCGAGGCC CTGCCGGAGG TGGGCGCCAA CGCCTTCGTG CAGCGCCAGC GCAACTCCAA CTCCGGGCGG GTCGACCAGT CGGGCCGGGA GGGCAAGGAA GCCTACAACC ACGGCTACGC CTCGCTGGAT GCCACCTGGG AAATGGACTT CTGGGGCCGC GTCGGCCGGC AGATCGAGTC CGCCGAGGCA TCCGTCGAGG CCAGCGAGGA ACTGCGCCGC AGCGTGCTGG TGCTGATCCT GGCCGACACC GCCAGCCACT ACATCCGCCT GCGCGGCGAG CAGGCCTTCG AGGCGGTGAT CCGCGACAAC CTGGAGATCG CCCGGCGCAA CCTGGAGCTG ACCGGCATCC GCTTCGACAA CGGCGTGGCG ACCCGTCTGG AGGTCGCCCA GGCCGAAGCC GAGGTGGCCA CCGTCGAAGC GCGCCTGCCG GCCACCCGCG AGCGCCAGGC ACGGCTGATC AACGCGCTGA GCTTTCTGCT CGGCGCCGGG CCGAACGCCC TGCGCGCCGA ATTGCAGGCG TCGCGGGACA TCCCCGTGCC GCCCAAGGCG GTGCCGCTCG GCCTGCCCTC GGAACTGGCC CTGCGCCGCC CCGACATCCG CGCGGCCGAG GCCCGCCTGC ACGCCGCCAC CGCCAGCATC GGCGTGGCGC AGGCCGACTT CTACCCGCGC ATCACCCTGA ACGGCGGCTT CGGCTTCGAG TCGTCGCAGT TCCTCCCCTT CGAATGGCAG AACCGCCTGT TCCTGCTCGG GTCGAGCCTC TACCTGCCGA TCTTCGAGGG CGGCCGCCTG AAGGGCCGCC TGGCCCTGCG CGAGGCCGAG CAGCAGGAAG CGGCCGTCGC CTACCGGCAC ACCGTGCTCA AGGCCTGGCA CGAGGTCGAC GACGCCCTCA CCGACTACGG CACCCGGCAG CAGCGACGGG TCAAGCTGAA CGAAGCGGTC CGCCAGAACG AAGAGGTGCT GGGCAACGCC CGCCAGCAGT ACCTGGCCGG CACGGTGGAC TTCCTCAACG TGCTCGGCGC GCAGCGCGAA CTGCTGAGCG TCGAGGAGCA ACGGGTGCGC AGCGATGAGG CGGTCGCCCT CGGCATCGTC GACCTGTACA GGGCGCTCGG CGGCGGCTGG GAAGGACAGG AGGAACGGGC GAGCCGCTGA
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Protein sequence | MKALPFLLCS GLALGGCSML GPDFVAPDRG AEERWERPAE PGVYSRPTLQ PLDPQWWKLF DDPLLSSLQE RAMAGNLDLR TASARLRQSR AIFQTLSGEA LPEVGANAFV QRQRNSNSGR VDQSGREGKE AYNHGYASLD ATWEMDFWGR VGRQIESAEA SVEASEELRR SVLVLILADT ASHYIRLRGE QAFEAVIRDN LEIARRNLEL TGIRFDNGVA TRLEVAQAEA EVATVEARLP ATRERQARLI NALSFLLGAG PNALRAELQA SRDIPVPPKA VPLGLPSELA LRRPDIRAAE ARLHAATASI GVAQADFYPR ITLNGGFGFE SSQFLPFEWQ NRLFLLGSSL YLPIFEGGRL KGRLALREAE QQEAAVAYRH TVLKAWHEVD DALTDYGTRQ QRRVKLNEAV RQNEEVLGNA RQQYLAGTVD FLNVLGAQRE LLSVEEQRVR SDEAVALGIV DLYRALGGGW EGQEERASR
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