| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_46390 |
|---|
| Symbol | |
|---|
| ID | 7763503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4714095 |
|---|
| End bp | 4715159 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643807484 |
|---|
| Product | secretion protein |
|---|
| Protein accession | YP_002801720 |
|---|
| Protein GI | 226946647 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGA CCCGTCGAAC CTCGCTGCTG CTCGTCGCGC TGGTGCTGTG TGCACTGGCG
GGCCTGCTGG CCTTCCTCCT GCTGCGCCCG GTGCGCTGGC AGGCAACCGA CAACGCCTAT
GTGCGCGCCG ATTACACCCT GGTGGCGCCG AAGATTTCCG GGCACGTCGT CGAACTGCTG
GTGGACGACA ACCAGTTCGT CCACCGCGGC CAGTTGCTGG CGCGCATCGA CCCGCGCGAC
TACGAATCCG AACTGGCCTC GGCCGAAGCG CGGGTCGCCG CCGCCGAGGC CGGGCTGCGG
CGGATCGCCG CCGACCTGGA GCAGCAGGGC TCGCGCATCG CCGCCGCGCA GGCCAGGGTC
GCCGCGGCGC AGGCCGAACA CGACTTCGCC CGCCAGGAAC TGAAGCGCTA CGAGAGCCTC
GCCAGCCAGG GCGCCGGCAG CCTGCAACTG GCCCAGCAGG CGCGCTCGCG CATCGGCACC
AGCCGCGCCG CCCTGGAGGA AGCCAGGGCG GCACTGGCCA GCGAAGAGCA ACAGGTGGCG
GTGCTGCAGG CCCGCCAGGG CGAAGCCGGC GCCGCCCTGC AACGCGCCGG GGCCGACCGC
CACCACGCCG AGCTGCGCCT CTCCTACACG CGCATCGAGG CGCCACTCGA CGGCGTGGTG
GGCCGCCGCT CGGTGCGCGT CGGCGCCTAC GTGCAGCCGG GCAACGCACT GCTCGCCGTG
GTGCCGCTGG ACGCCGTCTA CGTGGTCGCC AACTACCAGG AAACCCAGTT GACCGAAGTG
CAACCCGGCC AGGCGGTGGA AGTCAGCGTC GACACCTTTC CCGGCGCGCC GCTGCGCGCC
CGTGTGGACA GTTTCGCGCC GGCCACCGGC CTGAGCTTCG CGCCGGTCGT ACCGAGCAAC
GCCACCGGCA ACTTCACCAA GATCGTCCAG CGCATCCCGG TGAAGATCCG CTTCGAGCCG
GACCAGCCGC AGGTGGAAAA ACTCCGCGTG GGCATGTCGG TGGTCACCCG CATCGACGTC
CGCTCGGCGG CACCGCAGCC CGGACAAAGG AACGCGTCGC GATGA
|
|---|
| Protein sequence | MLMTRRTSLL LVALVLCALA GLLAFLLLRP VRWQATDNAY VRADYTLVAP KISGHVVELL
VDDNQFVHRG QLLARIDPRD YESELASAEA RVAAAEAGLR RIAADLEQQG SRIAAAQARV
AAAQAEHDFA RQELKRYESL ASQGAGSLQL AQQARSRIGT SRAALEEARA ALASEEQQVA
VLQARQGEAG AALQRAGADR HHAELRLSYT RIEAPLDGVV GRRSVRVGAY VQPGNALLAV
VPLDAVYVVA NYQETQLTEV QPGQAVEVSV DTFPGAPLRA RVDSFAPATG LSFAPVVPSN
ATGNFTKIVQ RIPVKIRFEP DQPQVEKLRV GMSVVTRIDV RSAAPQPGQR NASR
|
|---|
| |