Gene Avin_45920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45920 
Symbol 
ID7763458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4663577 
End bp4665382 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content64% 
IMG OID643807436 
Productacyl-CoA dehydrogenase 
Protein accessionYP_002801677 
Protein GI226946604 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACT ACAAGGCCCC CTTGCGGGAT ATCCGTTTCG TTCGCGATGA ATTGCTCGAC 
TACCCGGCTC ACTACCGGAG CTTGCCTGGT GGGGCGGATG CCTCGCCCGA TGTGGTGGAC
GCTATCCTCG AGGAGGGCGC GCGCTTCTGC GAGGAGGTGA TCGCGCCGCT CAACCGGGTG
GGGGATCTCG AGGGCTGTAG TTGGAGTGAG GCCGGAGTGA AGACCCCGAC TGGCTTCAAG
GAGGCCTACC GGCGTTTCGT CGAGGGCGGC TGGCCGAGTC TGGCGCATGC CGTCGAGCAT
GGTGGCCAGG GTTTGCCAGA GTCCCTCGGC GTCGCCATGA CCGAAATGAT CGGCGAAGCC
AACTGGGCCT GGGGCATGTA CCCGGGGCTG GCCCAGGGGG CGATGAATAC ATTGTCGGCC
CATGGTACCG GGGAGCAGAA GGCGACCTAT CTGGCCAGAC TGGTGTCCGG CGAGTGGACC
GGTACCATGT GCCTGACCGA GCCGCATTGC GGCACCGACC TGGGGCTTTT GCGCACCCGT
GCCGAGCCGC AGGCCGACGG CAGCTATCGG GTCAGCGGCA CCAAGATCTT CATTTCCGCC
GGCGAACATG ACCTGGCGGA GAACATCGTG CATATCGTGC TGGCCCGCCT GCCCGACGCC
CCTCCCGGAA CCAAGGGCAT TTCGTTGTTC ATCGTGCCGA AGTTCCTGCC GGCCGACGAT
GGTGGGCTGG GTGCGCGCAA CCAGGTCTCC TGCGGCTCCA TCGAGCACAA GATGGGCATC
CATGGCAACG CCACCTGCGT GATGAACTTC GACGGCGCTA CCGGTTTTCT GATCGGCCCG
CCGAACAAGG GCCTCAACTG CATGTTCACC TTCATGAACA CCGCCCGCCT GGGAACCGCA
TTGCAGGGCC TGGCGCATGC CGAGGTGGCT TTCCAGGGGG CGATCCGCTA CGCCCGTGAG
CGCCTGCAGA TGCGTGCCCT GAGCGGTCCG AAGGCACCGG AACTGCCCGC CGACCCGATC
ATCGTGCACC CCGACGTGCG GCGCATGCTG CTCACCATCA AGGCCTTCGC CGAGGGCAAT
CGGGCACTGC TGTATTTTTC CGCCAGGCAG GTGGACATTG CCCGTTGCAG CCAGGACGCC
GCGGAGCGTG CAGCGGCCGA CCTTTTGCTG GGCTTCCTCA CGCCGATTGC AAAGGCCTTC
ATGACCGAGA CCGGCTTCGA GGCCTCCAGC CTCGGCCTGC AGGTCTATGG CGGGCACGGT
TATATTCGCG AATGGGGCAT GGAGCAGAAC CTGCGCGACA GCCGCATCGC CATGCTCTAC
GAAGGGACCA CCGGCGTGCA GGCGCTGGAT CTGCTCGGGC GCAAGGTGCT TATGACCCAG
GGCGAGTCGC TCAAGGTCTT CACCAAGATC GTGCACAAGT TCTGCAAGGC CCACGCCGAA
GACGAGGGAC TCAGGGTCTT CGTCGAGCCG CTGGCCCGGC TGAACAAGGA GTGGGGCGAC
ATCACCCTGA AGATCGGTAT GCAGGCGATG CAGGACCGCG AAGAGGTAGG GGCTGCCGCA
GTCGATTACC TGATGTATTC CGGTTATGTC TGTCTGGCCT ATTTCTGGGC AGACATGGCA
CGTGTGGCCC AGCAGAAACT GGCTGCCGGC AGCGGCGAGG CGGCTTTCTA TAATGCCAAG
CTGCAGACTG CACGCTTCTA CTTCGCCCGC ATTTTGCCGC GCACCCGTGC GCACGTGGAG
GCCATGCTCA GCGGTGCCGG CCCGCTGATG GAAATGGCGG CGGAGGATTT CGATTTGGGC
TATTGA
 
Protein sequence
MPDYKAPLRD IRFVRDELLD YPAHYRSLPG GADASPDVVD AILEEGARFC EEVIAPLNRV 
GDLEGCSWSE AGVKTPTGFK EAYRRFVEGG WPSLAHAVEH GGQGLPESLG VAMTEMIGEA
NWAWGMYPGL AQGAMNTLSA HGTGEQKATY LARLVSGEWT GTMCLTEPHC GTDLGLLRTR
AEPQADGSYR VSGTKIFISA GEHDLAENIV HIVLARLPDA PPGTKGISLF IVPKFLPADD
GGLGARNQVS CGSIEHKMGI HGNATCVMNF DGATGFLIGP PNKGLNCMFT FMNTARLGTA
LQGLAHAEVA FQGAIRYARE RLQMRALSGP KAPELPADPI IVHPDVRRML LTIKAFAEGN
RALLYFSARQ VDIARCSQDA AERAAADLLL GFLTPIAKAF MTETGFEASS LGLQVYGGHG
YIREWGMEQN LRDSRIAMLY EGTTGVQALD LLGRKVLMTQ GESLKVFTKI VHKFCKAHAE
DEGLRVFVEP LARLNKEWGD ITLKIGMQAM QDREEVGAAA VDYLMYSGYV CLAYFWADMA
RVAQQKLAAG SGEAAFYNAK LQTARFYFAR ILPRTRAHVE AMLSGAGPLM EMAAEDFDLG
Y