| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45210 |
|---|
| Symbol | gltB |
|---|
| ID | 7763390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4583408 |
|---|
| End bp | 4587850 |
|---|
| Gene Length | 4443 bp |
|---|
| Protein Length | 1480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807370 |
|---|
| Product | glutamate synthase subunit alpha |
|---|
| Protein accession | YP_002801611 |
|---|
| Protein GI | 226946538 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG GTCTGTACCA TCCTGAAGAA TTCAAGGATA ACTGCGGCTT CGGTCTGATT
GCCCATATGC GCGGCGAGGC GAGTCATCAC CTGCTGCAAA CCGCCATTGA AGCGCTGACC
TGCATGACCC ACCGCGGCGG CATCAATGCC GACGGCAAGA CCGGCGACGG TTGCGGCCTG
CTGATGCAGA AGCCGGACGC CTTCCTGCGC GCCAAGGCCA AGGAGCATTT CGGCGCCGAA
CTGCCCGGGC AGTACGCGGT CGGCATGGTC TTTCTCAGCC AGGACGCCGC CGGGGCCGAG
ATCGCGCGTG CGCGCCTGAG CGAGGAAATC GCCGCGCAGG GACTGGGCCT GGTGGGCTGG
CGTGAAGTGC CGGTGGACAC CTCCGTGCTC GGTCCGCTGG CCCTCGAGCG CCTGCCGCGC
ATCGAGCAGG TGTTCGTCGC CGGCGAGGGC CTTTCCGACC AGGACTTCGC CATCAAGCTG
TTCTTCGCCC GGCGGCGCGC CGAGGTGGCG CTGGCGGACC AGGACTTCTA CGTCTGCAGC
CTGTCGCACA AGGACATCAT CTACAAGGGC CTGATGATGC CCGCCGATCT GGCGCGCTTC
TACCCGGACC TCGGCGACGA GCGCTTGGCC ACGGCGATCT GCGTGTTCCA CCAGCGCTTC
TCCACCAACA CCCTGCCGAG ATGGCCGCTG GCCCAGCCGT TCCGCTTCCT CGCCCACAAC
GGCGAGATCA ACACCATCAC CGGCAACCGC AACTGGGCCC AGGCGCGCCG CCTGAAGTTC
GCCAATGAAC TGCTGCCCGA TCTGGAAAGC TTGGCGCCGC TGGTCAACCG GACCGGCTCC
GACTCCTCGA GCATGGACAA CATGCTCGAA CTGCTGGTCA CCGGCGGCAT GGACCTGTTC
CGCGGCCTGC GCATGATCAT TCCGCCGGCC TGGCAGAACG TCGAGACCAT GGACGCCGAC
CTGCGCGCCT TCTACGAGTA CAACTCCATG CACATGGAGC CCTGGGACGG TCCGGCCGGC
GTGGTGCTGA CCGACGGCCG CTACGCCGTC TGTCTGCTCG ACCGCAACGG CCTGCGCCCG
GCGCGCTGGG TGACCACCGG GAACGGCTAC ATCACCCTGG CCTCGGAAAT CGGCGTGTGG
AACTACGCGC CGGAAGACGT CATCGCCAAG GGGCGGGTCG GCCCGGGGCA GATCCTCGCC
GTGGATACCG AAACCGGCGA GGTCCTGCAC ACCGACGACA TCGACAGCCG CCTGAAGTCG
CGCCATCCCT ACAAGAAATG GCTGCGCCAG AATGCCCTGC GCATCCAGGC CAACCTGGAC
GAGAGCGAAG GTACCTCGGC CTATGACGCC GAGCAGCTCA AGCAGTACAT GAAGATGTTC
CAGGTCACCT TCGAGGAGCG TGACCAGGTG CTGCGTCCGC TCGCCGAGCA GGGCCAGGAA
GCGGTCGGTT CGATGGGCGA CGACACCCCG ATGGCCGTAC TGTCCAAACG CGTGCGCTCG
CCCTACGACT ATTTCCGCCA GCAGTTCGCC CAGGTCACCA ACCCGCCGAT CGACCCGCTG
CGCGAGTCCA TCGTCATGTC CCTGGAAACC TGCCTGGGCG CCGAGCGCAA CGTGTTCGAG
GAAACCGCCG AGCACGCCAA CCGGGCGATC CTGACCACGC CGGTGATCTC CCCGGCCAAG
TGGCGCAGCC TCATGAACCT CGAGCGCGAG GGCTTCGAAC GGCATTTCAT CGATCTCAAC
TACGACGAGT CGCTGGGCCT CGAAGCCGCG GTGCGCAACA TCGCCGACCA GGCCGAGGAG
GCCGTGCGCG GCGGCAAGGT GATTCTGGTG CTGTCCGACC GCCATATCGT CCCCGGCAAG
CTGCCGGCGC ACGCTTCCCT GGCCGTCGGC GCGGTGCACC ACCGCCTGGT CGAGAAGGGC
CTGCGCTGCG ACTGCAACAT CCTGGTGGAG AGCGCCACCG CACGCGATCC GCACCACTTC
GCCGTGCTGC TGGGCTTCGG CGCCACCGCG ATCTACCCCT TCCTCGCCTA CGAGGTGCTG
GCCGACCTGA TTCGGACCGG CGAAGTGCTG GGCGACATGG ACGATGTGTT CAAGTACTAC
CGCAAGGGCA TTTCCAAGGG CCTTCTGAAG ATCCTCTCGA AGATGGGCAT TTCCACCGTG
GCTTCCTATC GCGGCGCCCA ATTGTTCGAG GCGGTCGGCC TGGCCGACGA GGTGGTGGAG
CTGAGCTTCC GTGGCGTAGC CTCGCGCATC AAGGGCGCGC GCTTCGTCGA CCTGGAGGCC
GAGCAGAAGC TGCTGGCCGC CGAGGCCTGG AGCAAGCGCA AGCCGATCCA GCAGGGCGGC
CTGCTGAAGT TCGTCTTCGG CGGCGAATAC CATGCCTATA ACCCGGATGT GGTGAGCACC
CTGCAGGCCG CCGTGCAGCA GGGCGACTAC GCCAAGTTCA AGGAATACAG CGCGCTGGTC
GACCAGCGGC CGGTGTCGAT GCTGCGCGAC CTGCTCAAGG TCAAGGAGGT CGCCCAGCCA
TTGGCATTGG ACGAGGTCGA GCCGCTGGGG GCGATTCTCA AGCGCTTCGA CTCCGCCGGC
ATCTCCCTCG GTGCCCTGTC GCCGGAGGCC CACGAGGCCC TGGCCGAGGC GATGAACAGC
CTGGGCGCGC GCTCCAACTC CGGCGAGGGC GGTGAGGACC CGGCGCGCTA CGGCACCATC
AGGAGTTCGA AGATCAAGCA GGTGGCCACC GGGCGCTTCG GGGTCACTCC CGAGTACCTG
GTCAACGCCG AGGTGTTGCA GATCAAGGTG GCGCAGGGCG CCAAGCCCGG CGAGGGCGGC
CAGTTGCCGG GCGGCAAGGT CAACGGCCTG ATCGCCCGCC TGCGCTACGC GGTACCCGGC
GTGACCCTGA TCTCGCCGCC GCCGCACCAC GACATCTATT CCATCGAGGA CCTGGCGCAA
CTGATCTACG ATCTCAAGCA GGTCAACCCG CAGGCACTGG TTTCGGTGAA ACTGGTGGCC
GAGCCGGGCG TCGGCACCAT CGCCGCCGGC GTGGCCAAGG CCTATGCCGA TCTGATCACC
ATCTCCGGCT ACGACGGCGG CACCGGCGCA TCGCCGCTGA CCTCCATCCG CTACGCCGGC
AGTCCCTGGG AACTGGGCCT GGCCGAAGCG CACCAGACCC TGCGCGGCAA CGACCTGCGC
GGCAAGGTGC GGGTACAGAC CGACGGCGGC CTGAAGACCG GCCTCGACGT GATCAAGGCG
GCCATCCTCG GCGCCGAGAG CTTCGGCTTC GGCACCGCGC CGATGATCGC CCTGGGCTGC
AAGTACCTGC GCATCTGCCA TCTGAACAAC TGCGCCACCG GCGTGGCCAC CCAGAACGAC
AAGTTGCGCA AGGAACACTT CATCGGCACC GTGGACATGG TGACCAACTT CTTCACCTAC
GTCGCCCAGG AAACCCGCGA ATGGCTGGCC AGGCTGGGCG TGCGCAGCCT CGGCGAACTG
ATCGGCCGCA CCGATCTGCT CGAGCTGCTG CCTGGCGAGA CCGCCAAGCA GGCCCACCTG
GACCTGAGTC CGCTGCTCGG CAGCGCCCAT GTCCCGGACG GCAAGCCGCA GTTCTGCGAG
GTGGAGAAGA ACCCGCCGTT CGATCCAGGC CTGCTGGCCG AGAAGATGGT CGAGATGGCC
CGGCCGGCGA TCGAGGCCAG GAGCGGCGGC GAGTTCGCGC TGGACATCTG CAACTGCGAC
CGCTCCATCG GTGCCCGGGT TTCCGGTGAG ATCGCCAAGG TCCACGGCAA CCAGGGCATG
GTCGACGCGC CGATCACCTT CCGCTTCAAG GGCACCGCGG GGCAGAGCTT CGGCGTATGG
AACGCCGGCG GCCTGAACCT CTACCTGGAA GGCGATGCCA ACGACTACGT GGGCAAGGGC
ATGACCGGCG GCAAGCTGGT GATAGTCCCG CCCCAGGGCA GCGTCTTCAA GACCCAGGAC
TCGGCCATTC TCGGCAACAC CTGCCTGTAC GGCGCCACCG GCGGCCGGCT GTTCGCCGCC
GGCACCGCCG GCGAGCGCTT CGCCGTGCGC AACTCCGGCG CCCATGCGGT GGTGGAGGGC
ACCGGCGACC ACTGCTGCGA GTACATGACC GGCGGCTTCG TCTGCGTGCT GGGCCGGACC
GGCTACAACT TCGGCTCCGG CATGACCGGC GGCTTCGCCT ATGTGCTCGA TCTGGACAAC
GGCTTCGTCG ACCGGGTGAA CCACGAACTG GTGGAAATGC AGCGGATCAG CGGGGAGTCC
ATGGAGGCTC ATCGCAGCCA CCTGCAGCAG GTGCTGGCCG AGTACGTGGA CGAGACCGGC
AGCCAGTGGG GTGCCCACCT GCTGGAAAAC CTGGACGACT ACCTGCGCAT GTTCTGGCTG
GTCAAGCCGA AGGCGGCGAG CCTGCAGTCG CTGCTTTCCA GCACCCGCGC CAACCCGCAG
TAA
|
|---|
| Protein sequence | MKAGLYHPEE FKDNCGFGLI AHMRGEASHH LLQTAIEALT CMTHRGGINA DGKTGDGCGL
LMQKPDAFLR AKAKEHFGAE LPGQYAVGMV FLSQDAAGAE IARARLSEEI AAQGLGLVGW
REVPVDTSVL GPLALERLPR IEQVFVAGEG LSDQDFAIKL FFARRRAEVA LADQDFYVCS
LSHKDIIYKG LMMPADLARF YPDLGDERLA TAICVFHQRF STNTLPRWPL AQPFRFLAHN
GEINTITGNR NWAQARRLKF ANELLPDLES LAPLVNRTGS DSSSMDNMLE LLVTGGMDLF
RGLRMIIPPA WQNVETMDAD LRAFYEYNSM HMEPWDGPAG VVLTDGRYAV CLLDRNGLRP
ARWVTTGNGY ITLASEIGVW NYAPEDVIAK GRVGPGQILA VDTETGEVLH TDDIDSRLKS
RHPYKKWLRQ NALRIQANLD ESEGTSAYDA EQLKQYMKMF QVTFEERDQV LRPLAEQGQE
AVGSMGDDTP MAVLSKRVRS PYDYFRQQFA QVTNPPIDPL RESIVMSLET CLGAERNVFE
ETAEHANRAI LTTPVISPAK WRSLMNLERE GFERHFIDLN YDESLGLEAA VRNIADQAEE
AVRGGKVILV LSDRHIVPGK LPAHASLAVG AVHHRLVEKG LRCDCNILVE SATARDPHHF
AVLLGFGATA IYPFLAYEVL ADLIRTGEVL GDMDDVFKYY RKGISKGLLK ILSKMGISTV
ASYRGAQLFE AVGLADEVVE LSFRGVASRI KGARFVDLEA EQKLLAAEAW SKRKPIQQGG
LLKFVFGGEY HAYNPDVVST LQAAVQQGDY AKFKEYSALV DQRPVSMLRD LLKVKEVAQP
LALDEVEPLG AILKRFDSAG ISLGALSPEA HEALAEAMNS LGARSNSGEG GEDPARYGTI
RSSKIKQVAT GRFGVTPEYL VNAEVLQIKV AQGAKPGEGG QLPGGKVNGL IARLRYAVPG
VTLISPPPHH DIYSIEDLAQ LIYDLKQVNP QALVSVKLVA EPGVGTIAAG VAKAYADLIT
ISGYDGGTGA SPLTSIRYAG SPWELGLAEA HQTLRGNDLR GKVRVQTDGG LKTGLDVIKA
AILGAESFGF GTAPMIALGC KYLRICHLNN CATGVATQND KLRKEHFIGT VDMVTNFFTY
VAQETREWLA RLGVRSLGEL IGRTDLLELL PGETAKQAHL DLSPLLGSAH VPDGKPQFCE
VEKNPPFDPG LLAEKMVEMA RPAIEARSGG EFALDICNCD RSIGARVSGE IAKVHGNQGM
VDAPITFRFK GTAGQSFGVW NAGGLNLYLE GDANDYVGKG MTGGKLVIVP PQGSVFKTQD
SAILGNTCLY GATGGRLFAA GTAGERFAVR NSGAHAVVEG TGDHCCEYMT GGFVCVLGRT
GYNFGSGMTG GFAYVLDLDN GFVDRVNHEL VEMQRISGES MEAHRSHLQQ VLAEYVDETG
SQWGAHLLEN LDDYLRMFWL VKPKAASLQS LLSSTRANPQ
|
|---|
| |