Gene Avin_43760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43760 
Symbol 
ID7763249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4423153 
End bp4424211 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content68% 
IMG OID643807231 
ProductLivM family inner-membrane translocator 
Protein accessionYP_002801472 
Protein GI226946399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.205767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA CTCACCTTCC CGCTTCCCAC GACGGCGCCC CGCTGGAACT GCAGGAGCGC 
CGCGCGCCCT GGCCGCTGGC GATCCTGCTG GCGGTCGCCT TCGTCCTGGT GCCCTGGCTG
GGCGACGACT ACTGGCTCAA CGCGATCTTG ATCCCCTTCC TGGTGCTGTC GCTGGCCGGG
CTCGGCCTCA ACCTGCTGAC CGGCTACACC GGGCAGACCT CGGTGGGCGC GGCCGGCTTC
ATGGCGGTCG GCGCCTTCGC CAGCTACGGC CTGCTGCTGC GCGTGCCGGG GCTGCCGTTG
CCGCTGGCGC TGGCCGGCGG CGGGGCGATC GCCGCGGCGG TCGGCTTGGT GTTCGGCATC
CCCAGCAACC GCATCAAGGG CTTCTACCTG ATGGTCACCA CCCTGGCGGC ACAGTTCTTC
CTCGAATGGG TGTTCACCAA GTTCCCCTGG TTCTACAACC ACGCCTCCTC GGGAACCATC
AGCGCGCCGC GCCTGGAGCT GTTCGGCCTC GACCTGCACG CGCCGGCCGG CCGCTACCTG
CTGGTGCTGG GCTGCGTGAC GCTGCTGACC TGGGTGGCGG TCAACCTGGT GCGCAGCCAG
ATCGGCCGCA ACTGGATGGC GATCCGCGAC ATGGACACCG CCGCCGCGGT GATCGGCATC
CCGGTGGACG GCTACAAGCG CCTGGCCTTC GCCGTCAGCT CCTTCTACCT GGGCGTGGCC
GGCGCGCTCT GGGCCTTCGC CTACCTGGGC ACCGCCAGCG CCGGCAGCTT CGACATCAAC
CGTTCGTTCC AGATCCTGTT CATCATCATC ATCGGCGGCA TGGGCAGCAT CGCCGGCAAT
TTCGTCGGCG CCGCCTTCAT CAGCCTGCTG CCGCTGCTGC TCAACCAGAT CGGCCAGGGC
CTGCTGGGCG GCAACGTCGA CGCCGGCCAG TTGCAGAACC TGCAGAAGAT CATCTTCGGC
GTGCTGATCA TCTGGTTCCT GGTCAAGGAA CCGGAGGGAC TGATCCGCCT GCTGGCCAAC
CTGGGCGAAC GGCTGAAAGC CTGGCCCCTG AGATTCTGA
 
Protein sequence
MTTTHLPASH DGAPLELQER RAPWPLAILL AVAFVLVPWL GDDYWLNAIL IPFLVLSLAG 
LGLNLLTGYT GQTSVGAAGF MAVGAFASYG LLLRVPGLPL PLALAGGGAI AAAVGLVFGI
PSNRIKGFYL MVTTLAAQFF LEWVFTKFPW FYNHASSGTI SAPRLELFGL DLHAPAGRYL
LVLGCVTLLT WVAVNLVRSQ IGRNWMAIRD MDTAAAVIGI PVDGYKRLAF AVSSFYLGVA
GALWAFAYLG TASAGSFDIN RSFQILFIII IGGMGSIAGN FVGAAFISLL PLLLNQIGQG
LLGGNVDAGQ LQNLQKIIFG VLIIWFLVKE PEGLIRLLAN LGERLKAWPL RF