Gene Avin_43730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43730 
Symbol 
ID7763246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4418973 
End bp4420313 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID643807228 
Producthypothetical protein 
Protein accessionYP_002801469 
Protein GI226946396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.959668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAT CCCTGAAACG CAAGCTCGCC GTGGCCCTGC TGGCCCTCGG CGTCCACCAC 
GCCCTGCCCG GCAGCGCCCT GGCGGCGCCG AACGAGCAGT TCTTCCCGCT GGCCACCTAC
CGGGTCGGCG CCTACGCCTC CAGCGGCATT CCGGTATGGG CCGGGATGAT CGACTACCTG
CGCTACATCA ACGAGGTGGA GGGCGGCATC AACGGCGTCA AGCTGGTCTG GCAGGAATGC
GAGACCGAGT GGACGGCGGA GAAGGGCATC GAGTGCTACG AGCGCTTCAA GAACGGCCTG
GACGGCGCGC CGGTGGCGGT CTACCAGCCC AACGGCGCGC CGGCCGCCTA CGCCCTGGCC
GACAAGGCCG CGGCCGACAA GATCCCGCTG ATCACCCTGG GCTACGGGCG CACCGAGGCC
ACCGACGGCA GTGTGTTCCC CTACAACTTC CCGGTGATGC TGACCTTCTA CAGCGAGGCT
TCGGCGGTGA TCGAGTACAT CGCCCGACGC GAGGGCGGCC TGGACAAGCT CAAGGGCAAG
AAGATCGCCA CCGTCTACCA CGACTCCGCC TACGGCCGGG AAACCCAGGG GCCGCTGGCG
CTGCTGGCCG AGAAGTACGG CTTCGAGAAC ATCCAGATCC CGGTGGCCGA TCCGGGCAAC
GAGCAGTCCG CGCAGTGGCG CCAGGTGCGC CAGGCGAAGC CGGACTGGGT GTTCCTGCGC
ACCTGGGGCG TGTCCACCCC GGTGGCGATC AAGACCGCGG CGCGCTTCGG CTTCCCGGTG
GAGCGCATCA TCGGCGACAT CTGGGCCAGC TCCGACGAGG ACGTGCTGCC CACGGGCCCG
GCCGGCAAAG GCTACCTGGC GCTCACCCCC TATCCGGGCG GCGCCGACTT CGAGATCCAC
AAAAAGATCA AGGAGCACAT CCTCGACAAG GGCAAGAGCG ACCTCAAGGA CCCGAAGAGC
TTCGGCAGCG TCTACTACAA CTCCGGGCTG GTCAACGCGG CCATCGCCGT CGAGGCGATC
CGCGCCGGGC AGGCCAGATT CGGCAAGCGC CCGCTCGACG GCGACGAGAG CCGCTGGGGC
CTGGAGCACC TGGACATCGA CGATGCCCGG CTCAAGGCCA TCGGTTTCCA CGGCCTGATG
CAGCCGCTCA GGCTGTCCTG CTCGGACCAC GAGGGCGGCG GCGCGGCCAA GGTGCAGCAG
TGGGACGGCA GCAGTTGGAA GCTGATCACC GACTGGGTGC AGGCCGACCG CCAGACCCTG
CGTCCGCTGA TCGAAGCCAA GTCCGGCGTC TACGCCAAGG AAAAGGGCAT CGCGCCGCGC
GACTGCCGCG CCGACGGCTG A
 
Protein sequence
MSSSLKRKLA VALLALGVHH ALPGSALAAP NEQFFPLATY RVGAYASSGI PVWAGMIDYL 
RYINEVEGGI NGVKLVWQEC ETEWTAEKGI ECYERFKNGL DGAPVAVYQP NGAPAAYALA
DKAAADKIPL ITLGYGRTEA TDGSVFPYNF PVMLTFYSEA SAVIEYIARR EGGLDKLKGK
KIATVYHDSA YGRETQGPLA LLAEKYGFEN IQIPVADPGN EQSAQWRQVR QAKPDWVFLR
TWGVSTPVAI KTAARFGFPV ERIIGDIWAS SDEDVLPTGP AGKGYLALTP YPGGADFEIH
KKIKEHILDK GKSDLKDPKS FGSVYYNSGL VNAAIAVEAI RAGQARFGKR PLDGDESRWG
LEHLDIDDAR LKAIGFHGLM QPLRLSCSDH EGGGAAKVQQ WDGSSWKLIT DWVQADRQTL
RPLIEAKSGV YAKEKGIAPR DCRADG