Gene Avin_43240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43240 
Symbol 
ID7763197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4364881 
End bp4365789 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID643807179 
ProductLysR family transcriptional regulator protein 
Protein accessionYP_002801420 
Protein GI226946347 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGCT ACGTCGAATT GCACAGTTTC GTTCAGGTCG CCCAGAAGGG CAGCTTCGCC 
GCGGCCGCGC TGAGCGAGGG GGTCACGCCG GCGATTCTCG GGCGGCGCCT GGATGCCCTG
GAGAAACGCC TGGGCGTCAA GCTGATGCAC CGCTCCACGC GCGGCCTGCG CCTGACCGAG
CTGGGCGAGC GCTTCCTGGA GCGCGCCAGG CAGTTGCTGC GCGAGTTCGA CGATGTCGAG
GCCGAGATCG CCAGCAACAG CTCGCTGGTC AAGGGGCATC TGGCCGTGTC CGCGCCGGCG
GCCTTCGGCC GGCGCCATGT GGCTGCGCAC GCCCAGGGGT TCCTGCAGCG TTTTCCCAAC
CTCAGGCTGT CGTTCAACCT GACCGATAGC GTCGTCGACC TGGTGAGCGA GGGGTTCGAC
ATGGGAATCC GCATCGGCGA GGTGCGGGAC CCCAACTATG TGGCGATCAG GCTGTTCCCC
AACCGGCGGG TGGTCTGCGG CACCCCGGCG TATTTCGCCA GGCATGGCGA ACCCCGGACG
CTCGAGGACC TGTCCCGGCA CAACTGCCTG GCCTTCACGC TGCAGGGCGG GCAGCAGCGC
GGCTGGACGT TCCTGCGCGA CGGGCAGCAG GTCGCCGCGA AGGTCGGCGG AAACCTGTCC
TGCAACGATG GCGAGCTGCT GTTTTCCTGG GTGTGCCAGG GGATCGGCAT CGGCTGGCGT
TCGACCTGGG AGATCCAGGG CGAACTCAAG CGCGGCGAAC TGGTGACGGT TCTCGATGAG
TTCGCGCTGC CCGAATACGA CATTCAGGCG GTGTTCCCCC AGCAGCGCTT CCTGCCCGCC
AAGGTGCGTT TTTTCATCGA CTACCTGAAG GAGCTGTACA ACACCCCCGG CTATTGGGAG
AGGGGGTGA
 
Protein sequence
MGRYVELHSF VQVAQKGSFA AAALSEGVTP AILGRRLDAL EKRLGVKLMH RSTRGLRLTE 
LGERFLERAR QLLREFDDVE AEIASNSSLV KGHLAVSAPA AFGRRHVAAH AQGFLQRFPN
LRLSFNLTDS VVDLVSEGFD MGIRIGEVRD PNYVAIRLFP NRRVVCGTPA YFARHGEPRT
LEDLSRHNCL AFTLQGGQQR GWTFLRDGQQ VAAKVGGNLS CNDGELLFSW VCQGIGIGWR
STWEIQGELK RGELVTVLDE FALPEYDIQA VFPQQRFLPA KVRFFIDYLK ELYNTPGYWE
RG