Gene Avin_42990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42990 
SymbolrecN 
ID7763173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4340284 
End bp4341957 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content68% 
IMG OID643807155 
ProductDNA repair protein RecN 
Protein accessionYP_002801396 
Protein GI226946323 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTGC ACCTGTCGAT CCACAACTAT GCCATCGTCG AACATCTCGA CCTCGAGCTG 
GACGCCGGCA TGACCGTCAT CACCGGCGAA ACCGGCGCCG GCAAGTCGAT CATGCTCGAT
GCCCTCGGCC TGGCCCTCGG CGACCGGACC GACAGCGGCG CCGTGCGGCC GGGAGCGGAC
AGGGCGGACA TCCTCGCCAG CTTCGATCTG ACGGAGATTC CCGAAGCTCG GGCCTGGCTC
GCCGAGCGCG ACCTGGAACG CGAAGGTCCG TGCATCCTGC GCCGGGTGAT CACTGCCGAA
GGCCGCTCGC GCGCCTACAT CAACGGCTCC CCATGCCCGC AGGGCGATCT CAGGGCGCTC
GGCGAACTGC TGATCGACGT CCACAGCCAG CACGAACACC AGTCCCTGCT GAAGAACGAC
ACCCAGCGCC GCCTGCTCGA CGAGTACGCG GGCGCCAGCG ATCTCGCCCG CCAGGTACGA
CTGGCCGCAC AGCGCTGGCG ACAGACCCGC CAGGAGCTGG AAAGGCTGAG CAATGCCGGC
GACGAGCAGC GTGCCCGCCA GCAACTGCTC AGCTACCAAC TGGAGGAACT GGAGAATCTC
GCCCTTGGCG ACCATGAACT GGAGGAGCTG GAGCAGGAAC ACAAGGCGCT GGCCAACGCA
GAGCATCTGC TCGGCAGTTG CCGTCAGGTC ATCGACCTGT GCAGCGAGAA CGACGCCGGC
AACGTGCTCT CCGCCCTGAC CGCCAGCCTG CAACGCCTGG CCAGCCTACA GGCGCAGCCC
GGCCCGCTCG GCGAGGCGAT CGATCTGCTG GCCAGCGCGC AGATCCAGGT CGAGGAAGCC
GTCGGCGAAC TGAACCGTTT TCTCGATCAC TTCGATACCG ACCCGCAGCG CCAGCAGAGC
ATCGAAGAAC GGCTCGACGC CATCTACAGC CTGGCGCGCA AGCACCGTGC CCAGCCACAC
GACCTGATCC CCCTGCAGCA GAGACTGCGA GACGAACTCA CCGGATTGAA CGCGGACGAC
GAAACCCTCG AGCGGCTCGG CCAGGAACTG GCGGCCTACG AGCGGCATTA CCAGGAAAAG
GCCGTGGAAC TCGGCGGCTT CCGGCGACAG GCGGCCGCAC ATCTGGGCAC GGCGGTCGAG
CAGCAAATGC AGCGGCTCGG CATGCCCGGC GGCCGCTTCG CCATCGAACT GCAGCCATGC
GGCTCGAGCG AGCCGCATCC CCAGGGGCTC GAACAGGCCG AATTCCTGGT CAGCGCCAAC
CCCGGCCAGC CATTGAAACC CCTGGCCAGG GTCGCTTCGG GTGGCGAACT GTCGCGCATC
AGCCTGGCGA TCCAGGTGAT TACCGCCCAG ACGTCACGCA CGCCGACCCT GGTGTTCGAC
GAGGTCGACG TCGGCATCGG CGGGCCGACC GCCGAGGTGG TCGGCCAACT CCTGCGCCAG
CTCGGCGAAC TCGGTCAGGT GCTGACCGTC ACCCACCTGC CCCAGGTGGC CGCCCAGGGC
CATCGCCACC TTTTCGTGCA CAAGATGCGC GGAGCCGGGG AAACCCGCAC GGCGGTCGCC
CCGCTGGAGG GCGATCCGCG TATCGAAGAA CTGGCCCGCA TGCTGGGCGG GCTCGAACTG
ACCGAGGAAT CACTGGCCCA CGCGCGCCGC ATGATCGGCA GCGCCCGAGT CTGA
 
Protein sequence
MLVHLSIHNY AIVEHLDLEL DAGMTVITGE TGAGKSIMLD ALGLALGDRT DSGAVRPGAD 
RADILASFDL TEIPEARAWL AERDLEREGP CILRRVITAE GRSRAYINGS PCPQGDLRAL
GELLIDVHSQ HEHQSLLKND TQRRLLDEYA GASDLARQVR LAAQRWRQTR QELERLSNAG
DEQRARQQLL SYQLEELENL ALGDHELEEL EQEHKALANA EHLLGSCRQV IDLCSENDAG
NVLSALTASL QRLASLQAQP GPLGEAIDLL ASAQIQVEEA VGELNRFLDH FDTDPQRQQS
IEERLDAIYS LARKHRAQPH DLIPLQQRLR DELTGLNADD ETLERLGQEL AAYERHYQEK
AVELGGFRRQ AAAHLGTAVE QQMQRLGMPG GRFAIELQPC GSSEPHPQGL EQAEFLVSAN
PGQPLKPLAR VASGGELSRI SLAIQVITAQ TSRTPTLVFD EVDVGIGGPT AEVVGQLLRQ
LGELGQVLTV THLPQVAAQG HRHLFVHKMR GAGETRTAVA PLEGDPRIEE LARMLGGLEL
TEESLAHARR MIGSARV