Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42710 |
Symbol | panB |
ID | 7763146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4305728 |
End bp | 4306561 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643807126 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_002801369 |
Protein GI | 226946296 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.177841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACCG ATGCCGTCCC GGACGACACC GACATGCCCG ACGTAACCCT GACCACTCTG CAAGGACTCA AGCAGCGCGG CGAAAAGATC GTCATGCTGA CCTGCTATGA CGCCACCTTC GCCCAGACCG CCAGCCAGGC AGGCATCGAG GTGCTGCTGG TCGGCGACTC CCTCGGCATG GTTCTGCAGG GCCACGACAG CACCCTGCCC ACCAGCGTGG CCGAGATGGC CTATCACACC ACCTGCGTCA GGCGCGGCAA CCGCGGCGCG CTGATCGTCA CCGATCTGCC GTTCATGTCC TATGCCTCGC TGGACCAGGC TCTGGAGAGC AGCGCCCAGG TCATGCGCGC CGGTGCCCAC ATGGTCAAGC TGGAGGGCGG CGCCTGGCTG TGCGAAACCG TGACGCGCCT GGCCGAGAAC GGCATCCCGG CCTGCGTGCA TCTGGGCCTG ACTCCGCAAT CGGTGAACCT GTTCGGCGGC TACAAGGTGC AGGGCCGCGA CGAAGGGCGG GCGCGCCAGT TGCGTGCCGA TGCCGAAGCC CTGGAGCGGG CCGGGGCGGC CATGCTGCTG CTGGAATGCG TGCCCAGCCC GCTGGCGGAA CAGATCACCC GTGCGGCGGG CGTGCCGGTC ATAGGCATCG GCGCCGGCGC CGCCACCGAT GGCCAGGTCC TGGTCATGCA CGACATGCTC GGGCTGTCCC TGACCGGGCG CACGCCGAAG TTCGTGAAAG ACTTCATGGC CGGCCAGGAA AACATCCAGG CGGCCTTCGC CGCGTACACG CATGCGGTCA AGCAAGGCGA ATTCCCCACA GCCGAACATG GATTTTCAGC ATGA
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Protein sequence | MPTDAVPDDT DMPDVTLTTL QGLKQRGEKI VMLTCYDATF AQTASQAGIE VLLVGDSLGM VLQGHDSTLP TSVAEMAYHT TCVRRGNRGA LIVTDLPFMS YASLDQALES SAQVMRAGAH MVKLEGGAWL CETVTRLAEN GIPACVHLGL TPQSVNLFGG YKVQGRDEGR ARQLRADAEA LERAGAAMLL LECVPSPLAE QITRAAGVPV IGIGAGAATD GQVLVMHDML GLSLTGRTPK FVKDFMAGQE NIQAAFAAYT HAVKQGEFPT AEHGFSA
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