| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42450 |
|---|
| Symbol | |
|---|
| ID | 7763121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4272034 |
|---|
| End bp | 4274349 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643807096 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002801344 |
|---|
| Protein GI | 226946271 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3008] Paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACT TGCCCGAGGC GAGGACCCGT CCGGCCTCTA CCTGGTCGGC GATCTGGGTG
TTGCCGTTGA TCGCCTTGCT GATCGGCTCC TGGCTTGCCT GGCGCGCCTA CGACCAGGCC
GGCATCGAAG TTCAGGTGCG CTTCACCAGC GGCGAAGGTA TCCAGATCAA CAAGACCGAG
GTGATCTACA AGGGTATGCC GGTCGGCAAG GTCGTAGGTC TTACCCTGGA CGACGAAGGC
TCGAACACTG GGGTGATCGC CACGCTGGAG ATGAACAAGG ACGTCGAGTC CTACCTGCGC
AGCAATACAC GCTTCTGGCT GGTCAAGCCA CGGGTTTCCC TGGCTGGCAT CACCGGTCTG
GAAACCTTGG TTTCCGGGAA CTACATAGCG GTCAGCCCTG GAGATGGCGA GCCGAACAAG
AAGTTCACCG CTCTGTCCGA AGAACCACCC CTGCCGGACA GCACGCCGGG ATTGCATATC
ACCCTGAAAG CCGAGCGGCT GGGCTCGTTG AATCGAGACA GTCCCGTGTT TTACAAGCAG
ATCCAGGTCG GCCGGGTAAA GAGCTACCAA CTGGCCGAGG ATCTGAGTAC CGTGGAGATC
AGGATCTTCG TCGAGCCGGC CTATGCCCAT CTGGTACGCA AGCACACGCG CTTCTGGAAT
GCCAGTGGAA TCACGGTCGA TGCCGGACTC GGCGGGGTCA AATTCCATAC CGAGTCCCTG
GCCAGCATCG TGGCGGGCGG CATTGCCTTC GCCACGCCGG AGAACCGCAA GGACAGCCCG
CCCACCGATC CGCGCCTGCC GTTTCGTCTC TATGACAATT TCGACGCGGC CCAGACCGGT
ATCAAGGTCA TGCTCGAGCT GAGCGACTTC GAGGGACTCC AGGCCGGGCG CACCCCGGTG
GTGTACAAAG GCATCCAGGT CGGCATCCTG AAAACCTTGC AGATCGAGCC CGGTCTTTCC
CGCGCCATGG CCGAGCTGAC TCTGGATCCG CTGGCCGAAG ATTTCCTGGT CGAGGGTGCC
GATTTCTGGG TGGTCAAGCC CTCCATCTCC CTGGGCGGGG TCACCGGCCT CGAAGCGCTG
GTGAAGGGCA ATTACATCGG CATGCGTCCG GGCGAGAAGG GGGCGTCGGT CAGGCGTTCC
TTCGTTGCCC GCAGCAAGGC GCCGCCCATG GATCTCGGCG CTCCCGGTCT GCACTTGGTG
CTGACCAGCG ATACCCTCGG TTCGCTGGAT ATCGGTAGTC CGGTGCTCTA CCGGCAGATC
AAGGTCGGTT CGGTGCAGAG TTTCCAGTTG TCCCGCAATC GCCGCCGTGT GCTGCTGGGC
GTGCACATCG AGCCGGAATA CGCCAGTCTG GTGAACAGCT CGACGCGCTT CTGGAATGCC
AGTGGCGTCA CCTTGAGCGG TGGTCTGTCC GGAATCGAGG TGAAGAGCGA GTCCCTGCAG
ACCTTGCTGG CCGGCGGCAT CGCTTTCGAA ACTCCCGATC CCGAGGCGTC CGCCAACACG
CGGCGGATTC CGCGCTACGC CCTGCACGCC GATCGCGAGA CCGCCCTGCA GGCCGGGCTG
GAGCTGCAGA TCCGCGTCGA CAGCGGTGAC GGGCTGAAAG CCGGCACGCC GATCCGCTAC
AAGGGGCTGG ATGTCGGCAA GGTGGAAGGG GTCGAACTGA GCGACGACCT GCAATCGGTC
CTGCTCCGCG CCCGGATCAC CCAGGCAGCC GAGCGCATCG CCCGTGTCGG CAGCCAGTTC
TGGGTGGTCA GGCCCGAACT CGGCCTGATG CGTACCGCCA ACCTGGATAC CCTGATCAGC
GGCCCCTACA TCGAGGTGCG GCCGGATGCC GGCAAGTCCT CCCGGCAGAC GAGTTTCGTC
GCCCTGTCGC GCGCGCCGGA AAGCGCCGCC AAGCCGGAGC CCGGCCTTCG GCTGGTGCTC
AGTTCGCCGC GGCGCGGTTC GCTCAAGGCG GGCGTACCGG TCACCTACCG CGAGGTGACG
GTCGGCAAGG TCACCGGATT CGAACTGGGG CCGAACGCCG ACCGGGTGCT GATCGGCATT
CTCATCGAAC CGCGCTATGC GCCTTTGGTG CGCAGTGGCA GCCGCTTCTG GAACGCCAGT
GGCTTCGGTT TCGATTTCAG CCTGCTCAAG GGGGCGCAAC TGCGTACCGA GTCGCTGGAA
ACCCTGCTCG AAGGCGGCAT CGCCTTCGCC ACGCCCGACG GCGAACGGAT GGGCAAGCCG
GCGCTTCCGG GGCAGACCTT CCCGCTATTC TCCGAAGCGG ACGGCGAATG GCTGCAATGG
GCGCCGAAGA TCGCTCTGGA AAAGGAGAGG AAGTGA
|
|---|
| Protein sequence | MNDLPEARTR PASTWSAIWV LPLIALLIGS WLAWRAYDQA GIEVQVRFTS GEGIQINKTE
VIYKGMPVGK VVGLTLDDEG SNTGVIATLE MNKDVESYLR SNTRFWLVKP RVSLAGITGL
ETLVSGNYIA VSPGDGEPNK KFTALSEEPP LPDSTPGLHI TLKAERLGSL NRDSPVFYKQ
IQVGRVKSYQ LAEDLSTVEI RIFVEPAYAH LVRKHTRFWN ASGITVDAGL GGVKFHTESL
ASIVAGGIAF ATPENRKDSP PTDPRLPFRL YDNFDAAQTG IKVMLELSDF EGLQAGRTPV
VYKGIQVGIL KTLQIEPGLS RAMAELTLDP LAEDFLVEGA DFWVVKPSIS LGGVTGLEAL
VKGNYIGMRP GEKGASVRRS FVARSKAPPM DLGAPGLHLV LTSDTLGSLD IGSPVLYRQI
KVGSVQSFQL SRNRRRVLLG VHIEPEYASL VNSSTRFWNA SGVTLSGGLS GIEVKSESLQ
TLLAGGIAFE TPDPEASANT RRIPRYALHA DRETALQAGL ELQIRVDSGD GLKAGTPIRY
KGLDVGKVEG VELSDDLQSV LLRARITQAA ERIARVGSQF WVVRPELGLM RTANLDTLIS
GPYIEVRPDA GKSSRQTSFV ALSRAPESAA KPEPGLRLVL SSPRRGSLKA GVPVTYREVT
VGKVTGFELG PNADRVLIGI LIEPRYAPLV RSGSRFWNAS GFGFDFSLLK GAQLRTESLE
TLLEGGIAFA TPDGERMGKP ALPGQTFPLF SEADGEWLQW APKIALEKER K
|
|---|
| |