Gene Avin_42180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42180 
Symbol 
ID7763096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4247216 
End bp4247737 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID643807071 
Product3-phenylpropionate dioxygenase subunit beta 
Protein accessionYP_002801320 
Protein GI226946247 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.242382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGC TGGAACTGGT GACCCTGGAA GAAGAACGCG CCGTACAGGC CTTCCTGCTG 
CGCGAGGCGC GGCTGCTGGA CGAAGACCGC TGGGACGACT GGCTGCTGAT GGTCTCCGAG
CGCATCCACT ACTGGATGCC GGGGATCGAG AACCGCCGCC GCGAGGACGC GCGGGGGGGC
TTCAACGCCG AACACATGGC CCTCTTCGAC GACGGCTACC GCGAACTGCA GCGCCGGGTG
GCGCGCTTCA AGCAGCCGTC GGCCTGGGCG GAGGACCCGC CGACGCGCAA CGTGCACCTG
ATCAGCAATA TCGAGGTGTA CGCCGGGGAG AATCCGGGCG AGTACCGGGC CTTTTCCTGC
TTCGTCAACG TGCGCAGCCG CGGGCTGGAC GAGCAGTACC AGATCGCCGG GCGGCGCGAG
GACGTGCTGT GCCGCGAGGG CGACGGGCTG AAGCTGCTGA GCAGGCGCAT CCTGATCCCC
AACGCCACCT TGCCCTGCAA GAACATCAAC ACCTTCCTCT GA
 
Protein sequence
MNTLELVTLE EERAVQAFLL REARLLDEDR WDDWLLMVSE RIHYWMPGIE NRRREDARGG 
FNAEHMALFD DGYRELQRRV ARFKQPSAWA EDPPTRNVHL ISNIEVYAGE NPGEYRAFSC
FVNVRSRGLD EQYQIAGRRE DVLCREGDGL KLLSRRILIP NATLPCKNIN TFL