Gene Avin_41690 details

Gene Information

• Locus tag: Avin_41690
• Symbol: acoR
• ID: 7763050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4201969
• End bp: 4203810
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 643807025
• Product: Sigma54-dependent transcriptional activator protein, AcoR
• Protein accession: YP_002801274
• Protein GI: 226946201
• COG category: [K] Transcription; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3284] Transcriptional activator of acetoin/glycerol metabolism

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.15857
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTGAAAC ATGCCAACGG CCTGCCCCAG GCGCCGGTTC CCGCACCCAT ACTCGATTCC 
TGGCGCCGCT CGCTGGAGCA GCACCGGCTC GATCCCGGCT CCCTGCAGGG GCCGCGCATC 
CTCGACCAGA CCCTGCTCAA GGAATGCCGC GAACGTTCTG AACTGTTCCT GCGCATCGCC 
AGCGAAGAGG TCGATCGCCT GCACGGCCAG GTGCGCGACG CCGACTACTG CGTGCTGCTC 
GCCGACGCCC AGGGGCGGAC CATCGACTAC CGGGTCGATT CGTCGATCCG CAGCGACTGC 
CGCAAGGCCG GCCTCGACCT CGGCACCTGG TGGTCGGAGG GCGAGGAGGG CACCTGCGGG 
GTGGCCACCG TACTGGCCAG CCGGATGCCG CTGACGGTGC ATAAGCGCGA CCATTTCCGC 
GCCGCCTTCA TCGGCCTGAC CTGCTCGGCG GCGCCGGTCT TCGATCCGCA GGGCGGACTG 
CTCGGCGTGC TCGACGCCTC GGCGGTGCAG TCGCCCGACG ACCGCCGCAG CCAGACCCTG 
GTCCGCCAAC TGGTGGCGCA GAGCGCCCGG CAGATCGAGA ACGCCTTCTT CATGCACAGC 
GCTCGCGGCC ACTGGATACT GCGTGCCCAC GCGGTGCCGG GCTACGTCGA CAGCCAGCCC 
GACTACCTGT TCGCCTGGGA CGCCGACGGC CGCCTGCTGG CGCTCAACCC GGCGGCGCGG 
CGCTGCCTGC TGCAGCGTTT CGGCGAGCTG CCGGCGCACA TCGGCGAGGT GTTCGACCCG 
GACGCCCTGC GCGCCGCCGA GGACGGCGCC GCCTGCCGGC TGCACGGACG CGGCGGCGAC 
CTCGCCCTGC ACGTGCGCCT GAGCGTGCCG CAGCGTCCGA GCCGGGTGGC GTTGCGCGGC 
GCGCCGCGCG CCGCCGAACT CGATCCGCGC ATCGCCGAGA ATCTGCGCCT GGCGGTGCGG 
GTCAAGGACC GCAACCTGCC GGTGCTGATC CAGGGCGAGA CCGGCGCCGG CAAGGAGGTC 
TTCGCCCGCC AGGTGCACGA GGCCAGCGCG CGCCGCGACA AGCCCTTCGT CACCCTGAAC 
TGCGCGGCGA TCCCCGAGAG CCTGATCGAG AGCGAGCTGT TCGGCTACGC CGCCGGCGCC 
TTTACCGGCG CCTCCAGCAA GGGCATGCGC GGCCTCTTGC AGCAGGCCGA CGGCGGCACC 
CTGTTCCTCG ACGAGATCGG CGACATGCCG CTGACCCTGC AGACCCGCCT GCTGCGGGTG 
CTCGCCGAGG GCGAGGTGGC GCCTTTGGGC GCGGCGCGGC GGCAGGCGGT GGACATCCAG 
GTGATCTGCG CCACCCACCG CGACCTGGCG ACGATGGTGG CGGACGGCAG CTTCCGCGAG 
GACCTGTACT TCCGCATCGG CGGCGCGCGT TTCGAGCTGC CGCCGCTGCG CAGCCGCAGC 
GACCGCCTGG CGCTGATCAA CCGCGTGCTG GAAGAGGAAG CGGCGTCCTG CGGCGAGCCC 
ATCGGCCTGA GCGCCGCGGC GCTGGAGTGC CTGCTCGGCT ACCGCTGGCC GGGCAACGTG 
CGCCAGCTCC GCCATGCCCT GCGCTACGCC TGCGCGGTGT GCGCCGGCGG GGTGGTCCGG 
CCCGACGACC TGCCGGCCGA GCTGCGTGGC GGGCGCCTGG CCACCGGCGA GGACGCCGGC 
GCGCTGGCCT CCGACCCGGA ACGCCAGGCG CTGCTCGATG CGCTGGTCCG CCACCGCTGG 
AAACCGGGAC CGGCGGCCGA ATCCCTCGGC ATCTCCCGCG CCACCCTGTA CCGCCGGGTG 
AACCAGCACG GCATCGAGAT GCCGGGGAAA AGGCGCGGCT GA 

 

Protein sequence

MLKHANGLPQ APVPAPILDS WRRSLEQHRL DPGSLQGPRI LDQTLLKECR ERSELFLRIA 
SEEVDRLHGQ VRDADYCVLL ADAQGRTIDY RVDSSIRSDC RKAGLDLGTW WSEGEEGTCG 
VATVLASRMP LTVHKRDHFR AAFIGLTCSA APVFDPQGGL LGVLDASAVQ SPDDRRSQTL 
VRQLVAQSAR QIENAFFMHS ARGHWILRAH AVPGYVDSQP DYLFAWDADG RLLALNPAAR 
RCLLQRFGEL PAHIGEVFDP DALRAAEDGA ACRLHGRGGD LALHVRLSVP QRPSRVALRG 
APRAAELDPR IAENLRLAVR VKDRNLPVLI QGETGAGKEV FARQVHEASA RRDKPFVTLN 
CAAIPESLIE SELFGYAAGA FTGASSKGMR GLLQQADGGT LFLDEIGDMP LTLQTRLLRV 
LAEGEVAPLG AARRQAVDIQ VICATHRDLA TMVADGSFRE DLYFRIGGAR FELPPLRSRS 
DRLALINRVL EEEAASCGEP IGLSAAALEC LLGYRWPGNV RQLRHALRYA CAVCAGGVVR 
PDDLPAELRG GRLATGEDAG ALASDPERQA LLDALVRHRW KPGPAAESLG ISRATLYRRV 
NQHGIEMPGK RRG