| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41640 |
|---|
| Symbol | pqqE |
|---|
| ID | 7763045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4198435 |
|---|
| End bp | 4199586 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643807020 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_002801269 |
|---|
| Protein GI | 226946196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.177576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCTC CTGGATCGAG CTGCACTGAG CCGGGCCCGC CGCTGTGGCT GCTGGCCGAG
CTGACCTATC GCTGCCCGCT GCAGTGTCCG TACTGCTCCA ATCCCCTGGA CTTCGCCCGC
CACGGCGCGG AGCTGTCCAC CGCCGAGTGG ATCGAGGTGT TCCGCCAGGC CCGCGAGCTG
GGCGCCGCCC AGCTCGGCTT CTCCGGCGGC GAGCCGCTGG TGCGCCAGGA CTTGAGCGAA
CTGATCGGCG CCGCTCGTGG CCTCGGCTAC TACACCAACC TGATCACCTC CGGCATCGGC
CTGAGCGAGG CGCGCATCGC CGAGTTCGCC ACGGCCGGCC TCGATCATAT CCAGGTCAGC
TTCCAGGCCG CCGACGCGGA GCTGAACGAC CTGCTGGCCG GCTCGGGCAA GGCCTTCGCC
CGGAAGCTGG CCATGGCCCG TGCGGTCAAG GCCCAGGGCT ACCCGATGGT GCTCAACTTC
GTCACCCACC GGCACAACAT CGACGCTATC GAGCGGATCA TCGAGCTGTG CCTCGAATTG
GAGGCGGATT ACATCGAGCT GGCCACCTGC CAGTTCTACG GCTGGGCCGA GCTGAACCGC
GCCGGACTCC TGCCGACCCG CGCCCAACTG GAGCGCGCCG AGCGCATCAC CAACCAGTGG
CGGGAGAAGC TCGCCGCGCA GGGCCATCCG TGCAAGCTGA TCTTCGTCAC CCCGGACTAC
TACGAGGAGC GTCCCAAGGC CTGCATGGGC GGCTGGGCCA GCCTGTTCCT CGACATCGCC
CCGGACGGCA CGGCGCTGCC CTGCCACAAC GCGCGGATGC TGCCGGTGCA GTTTCCCAAC
GTGCGCGAGC ACAGCCTGCG GCACATCTGG TACGACTCCT TCGGCTTCAA CCGCTTTCGC
GGCGACGACT GGCTGCCCGA GCCGTGCCGT TCCTGCGACG AGAAGGGGCG CGATTTCGGC
GGCTGCCGCT GCCAGGCCTT CCTGCTCACC GGCGATGCCG AGGCGACCGA TCCGGTGTGC
GCCAAGTCGG CGCATCACGG TCTGATCCTC GACGCCCGCC GCCAGGCGGA AGAGGCGCCG
CTCGGCCTGG AGCGGCTGGT CCATCGCAAC GCCCGGACCT CGGAGATCAT CTGCAGGAGT
CGCTCGGAGT GA
|
|---|
| Protein sequence | MSAPGSSCTE PGPPLWLLAE LTYRCPLQCP YCSNPLDFAR HGAELSTAEW IEVFRQAREL
GAAQLGFSGG EPLVRQDLSE LIGAARGLGY YTNLITSGIG LSEARIAEFA TAGLDHIQVS
FQAADAELND LLAGSGKAFA RKLAMARAVK AQGYPMVLNF VTHRHNIDAI ERIIELCLEL
EADYIELATC QFYGWAELNR AGLLPTRAQL ERAERITNQW REKLAAQGHP CKLIFVTPDY
YEERPKACMG GWASLFLDIA PDGTALPCHN ARMLPVQFPN VREHSLRHIW YDSFGFNRFR
GDDWLPEPCR SCDEKGRDFG GCRCQAFLLT GDAEATDPVC AKSAHHGLIL DARRQAEEAP
LGLERLVHRN ARTSEIICRS RSE
|
|---|
| |