Gene Avin_41360 details

Gene Information

• Locus tag: Avin_41360
• Symbol: upp
• ID: 7763019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4170878
• End bp: 4171516
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643806993
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_002801244
• Protein GI: 226946171
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCATCC ACGAAATCCG CCATCCGCTG ATCCGCCACA AGCTAGGCCT GATGCGCCGT 
GCCGACATCA GCACCAAGAG TTTCCGCGAA CTGGCCCAGG AGGTCGGCGC CCTGCTCACT 
TACGAGGCGA CCAAGGACCT GCCCCTGGAG AACTACCGGA TCGAGGGCTG GTGCGGCCCG 
GTGGAGGTGG AGAAGATCGC CGGCAAGAAA ATCACCGTGG TGCCCATCCT GCGCGCCGGG 
ATCGGCATGC TCGACGGCGT GCTGCGACTG ATCCCGAACG CCAAGGTCAG CGTGGTCGGC 
CTGTCGCGGG ACGAGGAAAC CCTGGTCGCG CACACCTACG TGGAAAAGCT GGTGGGCGAG 
ATCGACCAGC GCCTGGCGCT GATCGTCGAT CCCATGCTCG CCACCGGCGG CTCCATGGCC 
GCCACCGTCG ACATGCTGAA GAAGGCCGGC TGCAAGGAAA TCCGCGCCTT GGTGCTGGTC 
GCCGCGCCGG AGGGCATCCG CTTGCTCGAA CGGACCCACC CCGACGTGAC CATCTACACC 
GCGGCCATCG ACCAGCGGCT CAACGAGAAC GGCTACATCA TCCCCGGCCT GGGCGATGCC 
GGCGACAAGG TGTTCGGTAC CAAGCAGAAG CCGAGCTGA 

 

Protein sequence

MPIHEIRHPL IRHKLGLMRR ADISTKSFRE LAQEVGALLT YEATKDLPLE NYRIEGWCGP 
VEVEKIAGKK ITVVPILRAG IGMLDGVLRL IPNAKVSVVG LSRDEETLVA HTYVEKLVGE 
IDQRLALIVD PMLATGGSMA ATVDMLKKAG CKEIRALVLV AAPEGIRLLE RTHPDVTIYT 
AAIDQRLNEN GYIIPGLGDA GDKVFGTKQK PS