| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40280 |
|---|
| Symbol | hisS |
|---|
| ID | 7762914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4080609 |
|---|
| End bp | 4081895 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643806887 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_002801139 |
|---|
| Protein GI | 226946066 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0368177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA ACATCCAGGC CATCCGTGGC ATGAACGACA TCCTGCCGGA GCAGACCCCG
CTCTGGCGCT ATTTCGAGAA AAGCGTAGCC GGCCTGCTGG ACGGCTACGG CTACCGGCAG
ATCCGCATGC CGATCGTCGA GTTCACCGAG CTGTTCAAAC GCTCCATCGG CGAGGTCACC
GACATCGTCG AGAAGGAGAT GTACACCTTC GAGGACCGCA ACGGCGACTC CCTGACCCTG
CGTCCGGAAG GTACCGCCAG TTGCGTGCGG GCGGTGCTCG AGCACGGCAT CAGCGGCGGC
GGCCAGGTGC AGAAGCTCTG GTACGTCGGT CCGATGTTCC GCCACGAGCG CCCGCAGAAG
GGCCGCTACC GGCAGTTCCA CCAGATCGGC GTGGAGGTCT TCAACCTTCC GGGGCCGGAC
ATCGATGCCG AGCTGATCGT GCTGACCTGG CGCCTCTGGG GGCTGCTCGG CCTGCGCGAG
GCGGTGACCC TCGAACTCAA CAGCCTGGGC AGCAGCGAGG CCCGCGCGCG CTACCGCGAG
GCGCTGGTCG AGTACCTCTC GGCGCGTTTC GAGCGGCTCG ACGAGGACAG CCAGCGGCGC
CTGTCCAGCA ACCCGCTGCG CATTCTCGAC AGCAAGAACC CGGAGACCCA GGCCCTGCTG
GTGGATGCGC CCAAGTTGGC GGACTATCTG GACGAGGACT CGCGCCAGCA TTTCGAGGGC
CTCAAGGCGC GCCTGGATGT CGCCGGCATC CCCTACGTGA TCAATCCCAA GCTGGTGCGC
GGCCTGGACT ACTACGGCAA GACAGTGTTC GAGTGGGTCA CCGACAAGCT CGGCGCCCAG
GGCACCGTCT GCGCCGGCGG CCGCTACGAC GGTCTGGTCG AGCAGTTGGG CGGCAAGCCG
ACCCCGGCGG TGGGGTTCGC CATGGGCGTC GAGCGCCTGG TGCTGCTGCT GGAAACCCTG
GAGCGGGTGC CGGCCGAGCT GTCCCGGCAG GTCGACGTGT ATTTCTGCGC CTTCGGCGAA
GCGGCCGAGC TGGCGGCCCT GGGCCTGGCC GAGCGGCTGC GTGACGCGCT GCCGGGGCTG
CGCCTGGCGG TCAACGCCGG AGCTGGCAGT TTCAAGAGCC AGTTGAAGAA GGCCGACAAG
AGCGGCGCGC TCTACGCCCT GGTGCTGGGC GAGGACGAAC TGGCCGGGCG CATCGTCGGC
CTGAAGTCGC TGCGTGCCGA GGGCGAACAA CAGAGCGTGG GCTGGGACGA GCTGGGCGAG
CGCCTGGCGG CTTGCCTGCG GGCTTGA
|
|---|
| Protein sequence | MSKNIQAIRG MNDILPEQTP LWRYFEKSVA GLLDGYGYRQ IRMPIVEFTE LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASCVR AVLEHGISGG GQVQKLWYVG PMFRHERPQK
GRYRQFHQIG VEVFNLPGPD IDAELIVLTW RLWGLLGLRE AVTLELNSLG SSEARARYRE
ALVEYLSARF ERLDEDSQRR LSSNPLRILD SKNPETQALL VDAPKLADYL DEDSRQHFEG
LKARLDVAGI PYVINPKLVR GLDYYGKTVF EWVTDKLGAQ GTVCAGGRYD GLVEQLGGKP
TPAVGFAMGV ERLVLLLETL ERVPAELSRQ VDVYFCAFGE AAELAALGLA ERLRDALPGL
RLAVNAGAGS FKSQLKKADK SGALYALVLG EDELAGRIVG LKSLRAEGEQ QSVGWDELGE
RLAACLRA
|
|---|
| |