Gene Avin_39400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39400 
SymbolprfB 
ID7762829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3989693 
End bp3990535 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content66% 
IMG OID643806803 
Productpeptide chain release factor 2 
Protein accessionYP_002801055 
Protein GI226945982 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCG AAGAGAACGA CGAGGGTGCG GCGAACGATG TCGCCGCCGA AGTCGAGCGC 
CTGCGCGGCA TCCTCGAGAA ACTCGAGTTC CGCCGCATGT TCAGCGGCGA AATGGACGCC
AGGAACGCCT ACCTCGACGT CCAGGCCGGC TCCGGCGGCA CCGAGGCCCA GGACTGGGCC
AACATGCTGC TGCGCATGTA CCTGCGCTGG GCCGACAAGC ACGGCTTCGA CACCGAGATC
GTCGAACTGT CGGAAGGCGA GGTCGCCGGC ATCAAGAGCG CGACCGTGCA CGTCAGGGGC
GAGTACGCCT TCGGCTGGCT GCGTACCGAG ATCGGCGTGC ACCGCCTGGT GCGCAAGAGC
CCGTTCGACT CCGGCAACCG CCGGCACACC TCGTTCTCCG CGGTATTCGC CTCGCCGGAA
GTCGACGACA ACATCGAGAT CGACATCAAT CCGGCCGATC TGCGCGTCGA TACCTACCGC
TCGTCCGGGG CCGGCGGCCA GCACGTGAAC ACCACCGACT CCGCGGTGCG CATCACCCAC
CTGCCGACCA ACACCGTGGT GAGCTGCCAG AACGAGCGCT CCCAGCACGC CAACCGGGAC
CGCGCCATGA AGATGCTGCG CGCCAAGCTG TACGAGCTGG AGGTCATGAA GCGCAACGTC
GCCGCCCAGG CGCTGGAGGA CACCAAGTCG GACATCGGCT GGGGCCACCA GATCCGCTCC
TACGTGCTCG ACCAGTCGCG GATCAAGGAT CTGCGCACCG GCATCGAGAA CAGCAACTGC
GATGCGGTGC TGGACGGCGA TCTCGACGAG TTCATCGAGG CCAGCCTCAA GAAGGGCCTG
TGA
 
Protein sequence
MAVEENDEGA ANDVAAEVER LRGILEKLEF RRMFSGEMDA RNAYLDVQAG SGGTEAQDWA 
NMLLRMYLRW ADKHGFDTEI VELSEGEVAG IKSATVHVRG EYAFGWLRTE IGVHRLVRKS
PFDSGNRRHT SFSAVFASPE VDDNIEIDIN PADLRVDTYR SSGAGGQHVN TTDSAVRITH
LPTNTVVSCQ NERSQHANRD RAMKMLRAKL YELEVMKRNV AAQALEDTKS DIGWGHQIRS
YVLDQSRIKD LRTGIENSNC DAVLDGDLDE FIEASLKKGL