Gene Avin_38890 details

Gene Information

• Locus tag: Avin_38890
• Symbol: lpxD
• ID: 7762778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 3934584
• End bp: 3935651
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643806752
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_002801004
• Protein GI: 226945931
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACGC CCGCATTCAC TCTCGGCGAA CTGGCCGAGC GCCTCGGCGC CACGTTGCGC 
GGTGCGGCGG ACAGAACCGT TCGCGGGCTC GCCACCCTCG AGGAGGCGGG TCCGGAGCAC 
CTGAGCTTTC TCGCCAATCC CAAGTATCGC AAGTATCTGG GAAGCACCCG CGCCGGCGCC 
CTGCTGCTGA CCCCGGCGGA TGCCGAATCC TACGCGGGGG ACGCCCTGCT GCTGGCCGAT 
CCCTACCTGG CCTATGCGCG CTTGTCGCAT CTGTTCGATC CGAAGCCCGT GGCCCCTGCC 
GGAGTGCACG CCACTGCCGT GGTCGCCGCG GATGCCAGCA TCCATCCGAC CGCCAGTGTC 
GGCGCCTATG CGGTGATCGA GGCCGGGGCG CGGATCGAGG CCGGGGTCAG CGTGGGTGCC 
CATTGCTATA TCGGCGCCCG CAGCGTGATC GGCGAAGGCG GCTGGCTGGC CCCGAGGGTG 
ACGCTCTACC ACGATGTGCG GATCGGCCGG CGGGTGGTCG TCCAGTCCGG CGCGGTGATC 
GGTGGAGAGG GGTTCGGGTT CGCCAACGAG AAAGGCACCT GGCGCAAGAT CGCCCAGATC 
GGCGGGGTGA TCATCGGCGA CGACGTGGAA ATCGGCGCCA ATACCACCAT CGACCGCGGC 
GCACTGGCCG ATACTCTGAT CGGCAACGGC GTGAAGCTGG ATAACCAGAT CATGATCGCC 
CACAACGTGC AGATCGGCGA TCACACCGCC ATGGCCGGCT GCGTCGGCAT TTCCGGCAGC 
ACCAAGATCG GCAGGCACTG CATGATCGCC GGCGGCGTCG GCATGGTGGG ACATATCGAG 
GTGTGCGACG GGGTGTTCGT CACCGGGATG ACCATGGTCA CCCGCTCGAT TCACGAGCCG 
GGCGCCTATT CCTCCGGTAC CGCCATGCAG CCTGCCGCCG AATGGAAGAA GAGCGTCGCC 
CGCATTCGCC AACTGGACGA TCTGGCGCGG CGTCTGCAGC AGATGGAAAA GCGTCTGGGG 
GGCGTGACTT CCGACGGAGA TGCTCCATCA GAGGCTGACC CACTTTGA 

 

Protein sequence

MSTPAFTLGE LAERLGATLR GAADRTVRGL ATLEEAGPEH LSFLANPKYR KYLGSTRAGA 
LLLTPADAES YAGDALLLAD PYLAYARLSH LFDPKPVAPA GVHATAVVAA DASIHPTASV 
GAYAVIEAGA RIEAGVSVGA HCYIGARSVI GEGGWLAPRV TLYHDVRIGR RVVVQSGAVI 
GGEGFGFANE KGTWRKIAQI GGVIIGDDVE IGANTTIDRG ALADTLIGNG VKLDNQIMIA 
HNVQIGDHTA MAGCVGISGS TKIGRHCMIA GGVGMVGHIE VCDGVFVTGM TMVTRSIHEP 
GAYSSGTAMQ PAAEWKKSVA RIRQLDDLAR RLQQMEKRLG GVTSDGDAPS EADPL