Gene Avin_38850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38850 
SymbolrnhB 
ID7762774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp3931566 
End bp3932189 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID643806748 
Productribonuclease HII 
Protein accessionYP_002801000 
Protein GI226945927 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTGG GCCTGGATTT CGGCCGGGTC GAGGCGCTGG TCGCCGGTGT CGACGAGGTC 
GGCCGCGGTC CGCTCTGCGG GGCGGTGGTC ACCGCCGCGG TGATTCTCGA TCCGGAGCGG 
CCGATCCTGG GACTGAACGA CTCGAAAAAG CTTTCCGAAG CCCGTCGCGA GGCGCTCTCC 
GAGGAGATCC GCGAGAAGGC CCTGGCCTGG TGCATCGCGC GCGCCGAGGT GGAGGAGATC 
GACCGGCTGA ACATCCTTCA CGCGACGATG CTGGCCATGC GGCGTGCCGT GGAAGGGCTC 
GCCGTGACGC CCCGCCTGGC GCTGATCGAC GGCAACCGCT GCCCTAAACT GGCGGTGCCC 
TGCGCGCCGG TGATCAAGGG GGACGCCCAG GTGCCGGCCA TCGCCGCGGC CTCCATCCTC 
GCCAAGGTCG CCAGGGACCG GGAAATGCTC GTGCTGGATG CCCTCTATCC CGGTTACGGG 
CTGGCCCGGC ACAAGGGCTA TCCCACGGCC GTGCACCTGG AGGCCCTGGC CCGTCTGGGG 
CCGACCCCGA TCCATCGGCG CTCCTTCGCG CCGGTGCGCG AGCTGCTCGA CGTCGTTTCC 
ATCCCCTGTG CCCCGACCTC CTGA
 
Protein sequence
MQLGLDFGRV EALVAGVDEV GRGPLCGAVV TAAVILDPER PILGLNDSKK LSEARREALS 
EEIREKALAW CIARAEVEEI DRLNILHATM LAMRRAVEGL AVTPRLALID GNRCPKLAVP 
CAPVIKGDAQ VPAIAAASIL AKVARDREML VLDALYPGYG LARHKGYPTA VHLEALARLG 
PTPIHRRSFA PVRELLDVVS IPCAPTS