| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38400 |
|---|
| Symbol | |
|---|
| ID | 7762731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3883801 |
|---|
| End bp | 3884733 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643806705 |
|---|
| Product | universal stress protein family |
|---|
| Protein accession | YP_002800957 |
|---|
| Protein GI | 226945884 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC GCCAGTTGCT CGTCGTGATC GATCCCGCCC AGGAACCCCA GCCGGCCCTG
GAGCGGGCCG TCTGGCTGGC CCGTCATGGC GGCGCGGCTC TGGAGCTGCT GGCCTGCGAG
TTCGAGCAGA ACCTGGACGG CAGCCTGCTG TTCGACGAGC GGCAACACGA ACAGGCGCGC
AGCGCGCTGC TCGCCCACCG CCAGGCGCGG CTCGAAGAGC TGGCCGCGCC GCTGCGCGCC
GAGGGTCTGC AGGTACGGAC CGAGGTGCGC TGGGGCAGGC CGTTGCACAG GACGATCCTC
GGCCGGATCG AGGAGTTGAA GCCGGATCTG GTGTTCAAGG CCGCCACCCG CAACCACGGT
CTGCTCCGGC GCCTGCTGCT GGGCAACACC TGCTGGCAGT TGCTGCGCCA TTGTCCGGTG
CCGCTCTGGC TGGCGCATCA CGGCCAGTGG CAGGGCCGCC GCCTGTGCGC CGCCCTCGAT
CCGCTACACG ACGCCGACAA GCCGGCCCAG CTCGACCAGC GTCTGATCGC CACCGCCCGC
GAACTGGGCG AGCGCCTGCG GATGGACGCC CACTACCTGC ATTGCCATGC GCCGCTGCCG
CGCAGCCTGG TCTTCGATGC CGAACTGGTC GCCACCTACG ACGCCTATGT CGAACGCGGC
AACCGGCAGC ATCGCCAGGC CTTCGAACGG TTGCTCGCCC CCTATGCCAT TCCCGCCAGC
CATCGCCATC TGGAACAGGG TTATCCGGAA GAGGTGATTC CCCGCTTCGT GCGCGACCGG
CAGATCGACC TGCTGCTGAT GGGCGCCATC GCGCGCGGTC ACCTGGACAA CGCCCTGATC
GGCAATACCG CCGAGCGGGT GCTGGAGGCC CTGGAGTGCG ACCTTCTGAT CCTCAAGCCG
CAACCCTGGG AAAGTAGTGC GGCCCGTCAA TGA
|
|---|
| Protein sequence | MNLRQLLVVI DPAQEPQPAL ERAVWLARHG GAALELLACE FEQNLDGSLL FDERQHEQAR
SALLAHRQAR LEELAAPLRA EGLQVRTEVR WGRPLHRTIL GRIEELKPDL VFKAATRNHG
LLRRLLLGNT CWQLLRHCPV PLWLAHHGQW QGRRLCAALD PLHDADKPAQ LDQRLIATAR
ELGERLRMDA HYLHCHAPLP RSLVFDAELV ATYDAYVERG NRQHRQAFER LLAPYAIPAS
HRHLEQGYPE EVIPRFVRDR QIDLLLMGAI ARGHLDNALI GNTAERVLEA LECDLLILKP
QPWESSAARQ
|
|---|
| |