Gene Avin_38330 details

Gene Information

• Locus tag: Avin_38330
• ID: 7762724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 3876591
• End bp: 3877319
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643806698
• Product: hypothetical protein
• Protein accession: YP_002800950
• Protein GI: 226945877
• COG category: [S] Function unknown
• COG ID: [COG1714] Predicted membrane protein/domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCGC CTCTCGCCAA GCCCTCTGCC GACACCTTCC GGCAACCGCT CCTGGACACC 
CGCCACCTGG TGGAAACGCC GGAAGGCATC GACCTCGTGC TGCATCCGGC CGGCCTGGTG 
CCGCGCGCCC TCGCCTTCGC CGTCGACCTG ACGATCCGCG GGACGATCCT GCTGCTGGCC 
TTCCTGGCCC TCGGCCCGTT CGGCGAGTTG GGCATGGGCC TGGCCAGCCT GCTGTTCTTT 
CTCGTCACCT GGTGGTACAT GGTGCTCTTC GAGGTGCTCA ACCAGGGCTG CACGCCCGGC 
AAGCAACTAC TCGGCCTGCA AGTGGTGCAC GACGACGGCA CCCCGGTCGG CTGGGCCGCC 
TCGCTGACCC GCAACCTGCT GCGCGTCGTC GACCTGCTGC CGTTCGGCTA CACCCTGGGC 
ATCCTCAGTT GCCTCGCCCA CCCGACCTTC AAGCGCCTGG GCGACTTGGC CGCCGGCACC 
CTGGTGATCT ACCGGGAACG ACCTCAGCCA CGGCCTTCCC TGCCCGAGAT CGATGCCCAG 
CCGCTGCCCT TCGCCCCGCA GGCGGACGAG CGACGCGCCC TGCTCGCCTT CGCCGAGCGC 
CAGGCCGGAT TGTCCGCCGG CCGCCGCCGT GAGCTGGCGG GCATTCTCGC CGGGCCGCTG 
CGGGTACCGG AAGAGCAGGC CGAGGCCAGG CTCCTCGGCA TCGCCCGCGA ACTCATGGGC 
CCGCCATGA 

 

Protein sequence

MPAPLAKPSA DTFRQPLLDT RHLVETPEGI DLVLHPAGLV PRALAFAVDL TIRGTILLLA 
FLALGPFGEL GMGLASLLFF LVTWWYMVLF EVLNQGCTPG KQLLGLQVVH DDGTPVGWAA 
SLTRNLLRVV DLLPFGYTLG ILSCLAHPTF KRLGDLAAGT LVIYRERPQP RPSLPEIDAQ 
PLPFAPQADE RRALLAFAER QAGLSAGRRR ELAGILAGPL RVPEEQAEAR LLGIARELMG 
PP