| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38200 |
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| Symbol | pcaF |
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| ID | 7762711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3865658 |
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| End bp | 3866863 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643806685 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_002800937 |
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| Protein GI | 226945864 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCG ACGTCTTCAT CTGCGATGCC GTGCGCACGC CCATCGGCCG CTTCGGCGGC
GGCCTGGCCG GCGTGCGCGC CGACGACCTG GCCGCCATCC CGCTGAAGGC GCTGCTGGCG
CGCAACCCGC GACTCGATCC GGCCGCCGTC GATGAGGTGT TCCTGGGCTG CGCCAACCAG
GCCGGCGAGG ACAACCGCAA CGTGGCGCGC ATGGCGTCGC TGCTCGCCGG CCTGCCGGAG
ACGGTGCCGG GGGTGACACT CAACCGCCTG TGCGCCTCGG GCATGGATGC GATCGGCACC
GCCGCCCGCG CCATCGCCAG CGGCGAGATC GAGCTGGCCA TCGCCGGCGG CGTGGAGTCC
ATGTCGCGTG CGCCCTTCGT GATGGGCAAG GCCGACGCCG CCTTCTCGCG CAACATGAAG
ATCGAGGACA CCACCATCGG CTGGCGTTTC GTCAACCCGT TGATGAAGCA GCAGTACGGC
GTGGACTCCA TGCCGGAAAC CGCCGACAAC GTCGCCGACG ACTACCGGAT CGGCCGCGCC
GACCAGGACG CCTTCGCCCT GCGCAGCCAG CAGCGCGCGG CGGCGGCCAT GGAGTCCGGC
TACTTCGCCG AGGAGATCGT CCCGGTGGTC ATCAAGACCA GGAAGGGCGA GACGCTGATC
GACACGGACG AGCATCCGCG CCCGGACACC AGCGCCGAGG CGCTGGCCAG GCTCAAGCCG
GTCAACGGCG AGGGCAAGAC GGTTACCGCC GGCAACGCCT CGGGGGTCAA CGACGGCGCC
GCGGCGCTGA TCCTGGCCTC CGCCGAGGCG GTGCGCAAAT ACGGCCTGAA GGCCCGCGCC
CGGGTGCTCG GCATGGCCAG CGCCGGGGTC GCGCCGCGGA TCATGGGCTA CGGCCCGGTG
CCGGCGGTGC GCAAGCTCCT GCAGCGCTTG GAGCTGAGCA TCGACGCCTT CGATGTGATC
GAACTCAACG AGGCCTTCGC CAGCCAGGGC CTGGCGGTAT TGCGCGACCT GGACCTCGCC
GACGACGATG CGCGGGTCAA CCCCAACGGC GGCGCCATCG CCCTCGGCCA CCCGCTGGGC
ATGAGCGGCG CGCGCCTGGT GCTGACCGCC CTGCATCAAC TGGAGAAGTC CGGCGGCAGC
AAGGGCCTGG CGACCATGTG CATCGGCGTC GGCCAGGGGC TGGCGCTGGC CATCGAGCGC
GTCTGA
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| Protein sequence | MSRDVFICDA VRTPIGRFGG GLAGVRADDL AAIPLKALLA RNPRLDPAAV DEVFLGCANQ
AGEDNRNVAR MASLLAGLPE TVPGVTLNRL CASGMDAIGT AARAIASGEI ELAIAGGVES
MSRAPFVMGK ADAAFSRNMK IEDTTIGWRF VNPLMKQQYG VDSMPETADN VADDYRIGRA
DQDAFALRSQ QRAAAAMESG YFAEEIVPVV IKTRKGETLI DTDEHPRPDT SAEALARLKP
VNGEGKTVTA GNASGVNDGA AALILASAEA VRKYGLKARA RVLGMASAGV APRIMGYGPV
PAVRKLLQRL ELSIDAFDVI ELNEAFASQG LAVLRDLDLA DDDARVNPNG GAIALGHPLG
MSGARLVLTA LHQLEKSGGS KGLATMCIGV GQGLALAIER V
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