Gene Avin_38070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38070 
SymbolaroQ2 
ID7764144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp3852376 
End bp3852819 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content66% 
IMG OID643806672 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002800924 
Protein GI226945851 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.633165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACACA CTGTCCTCGT GCTCAACGGT CCCAATCTCA ACCTGCTCGG CACGCGCGAG 
CCAGCCACCT ATGGACGGGA AACCCTGGCC GACATCGCCG GCCTCTGCGC GCGCACCGCC 
GAGGAATGCG GTCTGGTCGT GGAGTTCCGC CAGACCAACC ATGAAGGCGA GTTGATCGAG 
TGGATCCACC TGGCCCGCAG CCGCTGCGCC GGCATCCTGA TCAATCCCGC CGCCTGGACG 
CACACCTCGG TAGCCATCCG CGACGCCCTG CTCGCCAGCG AGCTGCCGGT CATCGAAGTG 
CATCTTTCCA ACGTGCACAA GCGCGAACCC TTCCGCCACC GCTCCTTCGT GTCGGACATC 
GCCGTCGGTG TGATCTGCGG CCTCGGCAGC CACGGCTACC GCACGGCCCT GCAGCACTTC 
AGCCAGCTCC TGCAGAAGGA TTGA
 
Protein sequence
MTHTVLVLNG PNLNLLGTRE PATYGRETLA DIAGLCARTA EECGLVVEFR QTNHEGELIE 
WIHLARSRCA GILINPAAWT HTSVAIRDAL LASELPVIEV HLSNVHKREP FRHRSFVSDI 
AVGVICGLGS HGYRTALQHF SQLLQKD