Gene Avin_36120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_36120 
Symbol 
ID7762506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3679716 
End bp3680918 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID643806479 
ProductPhage integrase 
Protein accessionYP_002800734 
Protein GI226945661 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA TCAAACTCAC CAAGTCCGCC GTCGATGCCG CCAAGCCCCA GGCGCGGGCC 
GTCGAACTCC GGGACACTGT GGTGCCCGGC TTCCTCTGCA AGATCACCCC GGCTGGCCGC
AAGGTGTTCA TGCTCCAGTA CCGCACGAAC GCCGGCGAGC GCCGCAAGCC CGCCCTGGGC
CAGTACGGGG AACTGACCGT CGAGCAGGCC CGCGTCATGG CGCAGGAGTG GTTAGCCGAG
GTTCGCCGGG GCGGCGACCC GAGTGCGGCC AAGGTCGCCG CCCGCAAGGC GCCGACCATG
AAGGAGTATT GCACCACCTT CATGGAGGAC TACTCCAAGC AGCGCAACAA GCCCAGCACG
CAGCGCGGCT ATCGGGGCGT CATCGACCGC AACATCATTC CCATCCTGGG CCGGATGAAG
GTGCAGGACG TGAAGCGCCC GGACGTGGCC GCGCTGATGA AGAAGCTGGC CCACAAGCCG
GCCGAGGCGA ACCGCACCTT CGGCGTACTG CGCAAGATGT TCAACCTGGC CGAAGTATGG
GGGCTGCGTC CTGACGGCAC GAATCCTTGC CGGCACGTCC CGATGTTTCC GCCCGGCAAG
GAAACCCGGC TCATCGTGGA CGATGAACTG GTGCGGATCT TCCGTCACCT GGAGCACATG
GAAGCCGAGG GACTGGAGAA CTACGTCATC CCGCTGGCGA TCCGCCTGCA ATTCGAGTTT
GCCGCCCGTC GCTCCGAAAT CTGCCCGCTC GAATGGGACT GGGTTGATCT GGAAAAGCGC
CGTGTCGTCT GGCCCGACAG CAAGACGGGC GGCATTTCCA AGCCCATGAG CGAGGAAGCC
TATCGGTTGC TGTCCAGGGC GCCGCGCCGG GAAGGCTGCC CCTACGTCCT GCCGTCGCCC
AACGACCCGA CCCGGCACCT GACCTTTGGC GAGCACTATG GTGGCTGGAA GCGCGTGCTC
CGTGCCGCCG GCGTGCCGCA CGTCGGTACG CACGGCATCC GCCACCGCTC GACCACCGAC
ATCGCCAATT CGGGCGTGCC CACCAAGGTC GGCATGGCGC TGACGGGGCA CAAGACCGTG
GCGATGTTCA TGCACTACGT CCACACCGAG GACAAGCCGG TGCGCGATGC GGCCGAACTG
GTGGCGAGTC GGCGGCAGGC CATCACGGGC GGATCGCCGC GCCCCGCTGC GGCCACGGCA
TGA
 
Protein sequence
MARIKLTKSA VDAAKPQARA VELRDTVVPG FLCKITPAGR KVFMLQYRTN AGERRKPALG 
QYGELTVEQA RVMAQEWLAE VRRGGDPSAA KVAARKAPTM KEYCTTFMED YSKQRNKPST
QRGYRGVIDR NIIPILGRMK VQDVKRPDVA ALMKKLAHKP AEANRTFGVL RKMFNLAEVW
GLRPDGTNPC RHVPMFPPGK ETRLIVDDEL VRIFRHLEHM EAEGLENYVI PLAIRLQFEF
AARRSEICPL EWDWVDLEKR RVVWPDSKTG GISKPMSEEA YRLLSRAPRR EGCPYVLPSP
NDPTRHLTFG EHYGGWKRVL RAAGVPHVGT HGIRHRSTTD IANSGVPTKV GMALTGHKTV
AMFMHYVHTE DKPVRDAAEL VASRRQAITG GSPRPAAATA