Gene Avin_35880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35880 
Symbol 
ID7762482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3658820 
End bp3660010 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content70% 
IMG OID643806455 
ProductBeta-lactamase-like protein 
Protein accessionYP_002800710 
Protein GI226945637 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.184718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATC CTCCACTTTT CCTGCGCCAA GGCGTTCCGC CGGCGCACCT CGGTACGCGC 
ATTCACAGCA CCGTTCAGCA AGCGCTCGAC GACCAGCGGC TGGTCGGTGC CGTCATCCTC
GTGGCGCGCG ACGGCGAACT GATCCATCAG CAGGCCGCCG GCTTCGCCGA CCGCGAAAGC
GCGCGGCCGA TGACCTTGGA GGCGGTGTTT CGGCTGGCCT CGGTGAGCAA GCCCATCGTC
TCCACTGCGG CCCTGGCGCT GGTGGCGCAA GGCCGGCTCG ACCTGGATGC GGGCATCGAG
CACTGGCTGC CGGAATTCCA GCCCCGGCTG GCCGACCGCC GCTCGGCACG CATCACGGTG
CGACAACTGC TCAGCCATAC GGCCGGCCTC GGCTACCGCT TCTTCGAGGC CGACACAGCC
GGCCCCTATG CACGGGCCGG CGTGTCGGAC GGCATGGATG CGTCCGGCAT CAGCCTGGAG
GAGAACCTGC GCCGCCTCGC CAGCGTGCCG TTGTTGTACG AACCGGGCAC GGCCTGGGGC
TATTCATTGG CCACGGACGT GCTGGGCGCG CTGATCGCGC GCGCCCACGG CACGCCGCTG
CACGAGGCTG TGCGCCAACT CGTGACCGGC CCGCTGGGCA TGGTCGATAC GGGCTTCGTC
GCGCGCGATC CCCAGCGCGT GGCGACCGCC TATGTGAACG ACGCGCCGCA GCCGCATCGG
CTGGCCGAGG GTGAGACGGT CTCGGCCTTC GAGGGCGCCG TGGGCATCAC CTACAGCCCA
TCCCGCATCT TCGATCCGCA GGCATTTCCT TCGGGCGGTG CAGGCATGGC GGGGACGGCG
CAAGACCTGC TGCGCCTGCT GGAAGCCTTG CGCCAGGGCT GCGGTGCGTT CCTGCCCAAC
GAATGGATCG CGGAGATGGC GCGGGATCAA ACGGACGGCC GGGAACTGCC CGATGCGCCG
GGCTTCGGCT TCGGACTGGG ATTCTCGGTC TTGCGCGACC CGGTGCTGGC CGCTTCCCCC
GAATCGGCGG GCACCTGGCG CTGGGGCGGT GCCTACGGCC ACTCGTGGTT CGTGGATCGA
GCGCAGGGCC TGAGCGTCGT GGCCTTCACC AACACGCTGT ACGAAGGCAT GTCCGGCCGC
TTCGTCACCG ACCTGCGCGA TGCCGTCTAT GGCGCGCTGG AGGTGCGCTG A
 
Protein sequence
MTNPPLFLRQ GVPPAHLGTR IHSTVQQALD DQRLVGAVIL VARDGELIHQ QAAGFADRES 
ARPMTLEAVF RLASVSKPIV STAALALVAQ GRLDLDAGIE HWLPEFQPRL ADRRSARITV
RQLLSHTAGL GYRFFEADTA GPYARAGVSD GMDASGISLE ENLRRLASVP LLYEPGTAWG
YSLATDVLGA LIARAHGTPL HEAVRQLVTG PLGMVDTGFV ARDPQRVATA YVNDAPQPHR
LAEGETVSAF EGAVGITYSP SRIFDPQAFP SGGAGMAGTA QDLLRLLEAL RQGCGAFLPN
EWIAEMARDQ TDGRELPDAP GFGFGLGFSV LRDPVLAASP ESAGTWRWGG AYGHSWFVDR
AQGLSVVAFT NTLYEGMSGR FVTDLRDAVY GALEVR