Gene Avin_35810 details

Gene Information

• Locus tag: Avin_35810
• ID: 7762475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 3652713
• End bp: 3653264
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643806448
• Product: Regulatory protein, TetR-family
• Protein accession: YP_002800703
• Protein GI: 226945630
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGTGT TCTGGGCCAA AGGCTACGAG GCGGCCTCAC TCACCGAACT GATGGTCGCC 
ATGGGCCTCA ATCCGCCCAG CTTCTACGCC GCCTTCGGTT CCAAGGACGC CCTGTACCGG 
GAGTCGGTCG ATTTGTACCT CGCTACGGTG GGGGGCGGCA GCATGAAGGT GCTGGCCGAG 
ACGCCAGGCG TGCGCGAGGC CATCGAGCGG ATGCTGCTGG CGAGCCTGGA GGTCGCCCTG 
GCCAGCCCGT CCTCCGGCGG CTGCATGGTC AGCCTGGGTC TGTTCAACTG CCAAGCGCAG 
AACGCGCCCT TGCGCGAGCA CATGTGCGAA CTGAGGCGCA GCACCACAAG GTTGATTCGC 
CAGCGCCTGG AGCGCGGCGT CGGCGACGGC GAACTGGCGG CCGGCACCGA TACCGAACGC 
CTGGCGACTT ACTTCGCCAC CATCATTCAG GGCATCTCCT TCCAGGCTCA GGATGGCGCC 
GGGCGGCAGG CATTGCTCGG TATCGTCGAA ACGGCGATGG CGGCATTCGA GGCGACGAGC 
AATCCGGTTT GA 

 

Protein sequence

MDVFWAKGYE AASLTELMVA MGLNPPSFYA AFGSKDALYR ESVDLYLATV GGGSMKVLAE 
TPGVREAIER MLLASLEVAL ASPSSGGCMV SLGLFNCQAQ NAPLREHMCE LRRSTTRLIR 
QRLERGVGDG ELAAGTDTER LATYFATIIQ GISFQAQDGA GRQALLGIVE TAMAAFEATS 
NPV