| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35700 |
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| Symbol | trbD |
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| ID | 7762464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3642693 |
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| End bp | 3642977 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643806437 |
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| Product | P-type conjugative transfer protein TrbD |
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| Protein accession | YP_002800692 |
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| Protein GI | 226945619 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.163675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGCGG CCAACGAAGG CGCGCCAGGC TTCGCGCCCG GTTTCGAGAT TCCGCTGCAT
CGCTCGCTGA CCGAGCCGAT CCTGCTGGGC GGTGCGCCGC GCACCGTGGC GATCGCCAAC
GGCACGCTGG CCGCCGCCGT CGGGCTGGGC CTGCAACTGT GGATTCCCGG CGTCGTGCTC
TGGATCGTCG GCCATTCGCT GGCCGTGTGG GGCGCGCGTG TCGATCCGCA GTTCATGCAG
GTCTTCGCCC GACACATCAA GCACCGCCCG CTGCTGGACG TGTGA
|
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| Protein sequence | MSAANEGAPG FAPGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL
WIVGHSLAVW GARVDPQFMQ VFARHIKHRP LLDV
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