| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35650 |
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| Symbol | trbF |
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| ID | 7762459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3637076 |
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| End bp | 3637780 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643806432 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_002800687 |
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| Protein GI | 226945614 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.109489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCA AACGCCCGCA GGTGCGCTAT GCCGATACGC CGCAGCCTGC CACCCCGTAC
CAATCCGCCG CGCAGGTGTG GGACGACCGT ATCGGTTCGG CCCGCGTCCA GGCGAAGAAC
TGGCGATTCA TGGCCTTCGG CTGCCTCACG CTCGCGCTGC TGATGGCCGG CGGCCTGGTG
TGGCGCTCGG CGCAGTCCAT CGTCACGCCC TACGTCATCG AGGTCGATCA GGCCGGGCAG
GTGCGCGCTG TCGGCGAAGC TGCCACGCCG TACCGACCCG CCGATGCGCA GATCGCCTAC
CACTTGGGCC GCTTCATCGG CCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTGGTGCGC
CAGAACTGGC TCGACGCCTA CGACTACACC ACCGACCGCG GCGCGGCCGT GCTCAACGAC
TACGCGAGCA AGAACGATCC GTTCGCCCGT GTCGGCCGCG AGTCGGTGAC GGTGCAGATC
ATCAGCGTTA CGCGCGCCAG CGATGCCTCG TTCAACGTCC GTTGGACGGA ACAGCGGTTC
GTCAACGGCG CACCCGCTGG CACCGAACGC TGGAACGCCG TGCTTTCCAC CATCGTGCAA
ACCCCGCGCA CCGAACAGCG CCTGCGTAAG AACCCGCTGG GGATCTACGT CAACGGCTTG
TCGTGGAGCC GCGAACTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFKRPQVRY ADTPQPATPY QSAAQVWDDR IGSARVQAKN WRFMAFGCLT LALLMAGGLV
WRSAQSIVTP YVIEVDQAGQ VRAVGEAATP YRPADAQIAY HLGRFIGLVR SLSIDPIVVR
QNWLDAYDYT TDRGAAVLND YASKNDPFAR VGRESVTVQI ISVTRASDAS FNVRWTEQRF
VNGAPAGTER WNAVLSTIVQ TPRTEQRLRK NPLGIYVNGL SWSRELDSSE GAKP
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