Gene Avin_35300 details

Gene Information

• Locus tag: Avin_35300
• ID: 7762425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 3605709
• End bp: 3606365
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643806398
• Product: hypothetical protein
• Protein accession: YP_002800654
• Protein GI: 226945581
• COG category: [R] General function prediction only
• COG ID: [COG4106] Trans-aconitate methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCCAT CCGAAGAAGT ATCACCGGCA CTCGATGCGA ACGACCTCCG GCAGATCACC 
GCAACCACGC TGCAACACTA CACTGCATCC GCCGAAGCCT TCCGCGAAGG TACCCGCGAT 
CACGATGTCC GCCAGAACAT CGACGCTCTG CTGCGCCACA TCGAAGGGCC ATCGCCTTTC 
ATTATTCTCG ACTTCGGTTG CGGTCCAGGG CGCGATCTCA AGGCCTTCCG AGCTCTCGGC 
CATCAGCCGA TCGGCCTGGA CGGCTGTCCC CGCTTCGCTG AAATGGCCCG CACCGACTCG 
GGCTGCGAGG TCTGGCAGCA GGACTTCCTG CGACTCGATC TGCCGACTGG ACGTTTCGAC 
GGCATCTTCG CCAACGCCTC GCTGTTCCAT GTCCCCACCC AGGAACTCTC CCAGGTGCTA 
GGCAAGCTGT ATGCAGCCCT CAAGCCTGGC GGCGTGCTGT TCAGCTCCAA TCCACGCGGG 
CACAACGAAG AGGGCTGGAA TGGGAACCGC TATGGCAGCT ATCACGACCT CGACGCCTGG 
CGACGTTATC TGAACGCGGC CGGCTTCGTC GAACTCGAAC ACTACTATCG CCCCAGCGAT 
CTTCCATGCG AGCAACAACC CTGGCTCGCC AGCGTGTGGC GCAAGCCAGG ACTCTGA 

 

Protein sequence

MIPSEEVSPA LDANDLRQIT ATTLQHYTAS AEAFREGTRD HDVRQNIDAL LRHIEGPSPF 
IILDFGCGPG RDLKAFRALG HQPIGLDGCP RFAEMARTDS GCEVWQQDFL RLDLPTGRFD 
GIFANASLFH VPTQELSQVL GKLYAALKPG GVLFSSNPRG HNEEGWNGNR YGSYHDLDAW 
RRYLNAAGFV ELEHYYRPSD LPCEQQPWLA SVWRKPGL