Gene Avin_31220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_31220 
Symbol 
ID7762022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3227039 
End bp3227965 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID643805997 
ProductTranscriptional regulator, LysR family 
Protein accessionYP_002800261 
Protein GI226945188 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGG TCTCCGAGCT GACCTTCTTC ACCCTGCTGG TGCGCCTGGG CAGCCTCGCG 
GCCACCGCGC GCGAGCTGAA CCTGACGCCG CCGGCGGTCT CGAAGCGGCT GGCGCAACTG
GAACGGCGCC TCGGTGTGCG CCTGCTCAAC AGGACCACGC GCAGCATCAG CCTCACCGGC
GAAGGCGAGC TCTATCTGCT CAACGCCCAG CGCATCCTCG GCGAGATCGA GGAGATGGAA
CGCCAGGTGT CGAGCAGCCG GGCCGCGCCC AAGGGCCTGC TGCGCGTCAA TGCCCCGCTC
GGCTTCGGCC GCACCTACGT CGGCCCGGCG ATCTCCTCGT TCGTCAAGCG CTACCCGGAT
GTGGAGGTGC AACTGCAACT GACGGATCGC CCGATCAACC TGCCGAACGA TGCGATCGAC
GTCGGCATCC GCTTCGGCGA GCTGCCGGAC TCGCGCCTGA TCGCCCGCAG GATCGCCTCG
AACCGCCGCC TGCTGTGCGC CGCTCCCGCC TACCTGCAGG CCTGCGGACG CCCGGAGACT
CCCAAGGACC TGATGCGTCA CAACTGCATC GTGCTGCGCC AGAACGATGC GGCCTTCGGT
GTCTGGCGGC TGAGCCGGGG CAAGCAGAGC GAATCGATCA AGGTGCGCGG CAGCCTCAGC
ACCAACGAAG GGGAAGTCGC GCTGAACTGG GCGCTGGACG GCCACGGTAT CCTCATGCGG
GCCGAATGGG ACCTCGCCAA ATACCTGCGC AGCGGGCGGC TGGAGGAAGT GCTGGAGGAA
TACGAAACCC CGCCGGCGGA CATCTACGCC GTCTATCTCG AACGCCTCAA CCTGTCCGCC
AAGGTGTCCT TTTTCGTCGA TCACCTGCGC GACTTCTTCC AGCGCAGCGT CGACGGGCAG
AGCGACAGCC GCTCGCCCTG GCGATGA
 
Protein sequence
MNPVSELTFF TLLVRLGSLA ATARELNLTP PAVSKRLAQL ERRLGVRLLN RTTRSISLTG 
EGELYLLNAQ RILGEIEEME RQVSSSRAAP KGLLRVNAPL GFGRTYVGPA ISSFVKRYPD
VEVQLQLTDR PINLPNDAID VGIRFGELPD SRLIARRIAS NRRLLCAAPA YLQACGRPET
PKDLMRHNCI VLRQNDAAFG VWRLSRGKQS ESIKVRGSLS TNEGEVALNW ALDGHGILMR
AEWDLAKYLR SGRLEEVLEE YETPPADIYA VYLERLNLSA KVSFFVDHLR DFFQRSVDGQ
SDSRSPWR