Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_30490 |
Symbol | ssuC |
ID | 7761949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3158717 |
End bp | 3159511 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805925 |
Product | aliphatic sulfonate ABC transporter permease protein |
Protein accession | YP_002800189 |
Protein GI | 226945116 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.168678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC GCAACATCGA CAAACTGGCC CTGCGCCTGT CGCCCTGGGT GCTGCCGCTG GCGTTGCTCG GGTTCTGGCA GGGGGCGGTG GCCAGCGGAC TGCTCTCCAC CCGCATCCTG CCGGCGCCGA GCGCGGTGCT GGAAGCCGGC TGGGCGCTGC TCTCCAGCGG CGAGATCTGG ACGCACCTGG CCATCAGCGG CTGGCGCGCC GGCATCGGCT TCGCCATCGG CGGCGGCCTG GGCCTGCTGC TCGGCTTCAT CACCGGCCTG TCGAAGTGGG GCGAGCGCCT GCTGGACAGT TCGGTGCAGA TGGTGCGCAA CGTGCCGCAC CTGGCGCTGA TTCCGCTGGT GATCCTCTGG TTCGGCATCG ACGAGTCGGC GAAGATCTTC CTGGTCGCCC TCGGCACCCT GTTCCCCATT TACCTGAACA CCTACCACGG CATCCGCAAC GTCGATGCCG GCCTGGTGGA GATGGCGCGC AGCTACGGGC TGTCCGGATT CTCTCTGTTC CGTCAGGTGA TCCTGCCCGG TGCGCTGCCG TCGATCTTGG TCGGCGTGCG CTTCGCCCTC GGTTTCATGT GGCTGACGCT GATCGTCGCG GAAACCATTT CCGCCAGTTC CGGCATCGGT TACCTGGCGA TGAACGCCCG CGAGTTCCTG CAGACCGACG TGGTGGTACT AGCGATCCTG CTCTACGCCG TGCTCGGCAA GCTGGCCGAC GTGGCGGCGC GTACCCTGGA GCGCCTGTGG CTGCGCTGGC ATCCGGCCTA TCAGGTCAAG GCGGGTGCCC AATGA
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Protein sequence | MTTRNIDKLA LRLSPWVLPL ALLGFWQGAV ASGLLSTRIL PAPSAVLEAG WALLSSGEIW THLAISGWRA GIGFAIGGGL GLLLGFITGL SKWGERLLDS SVQMVRNVPH LALIPLVILW FGIDESAKIF LVALGTLFPI YLNTYHGIRN VDAGLVEMAR SYGLSGFSLF RQVILPGALP SILVGVRFAL GFMWLTLIVA ETISASSGIG YLAMNAREFL QTDVVVLAIL LYAVLGKLAD VAARTLERLW LRWHPAYQVK AGAQ
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