Gene Avin_30000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30000 
Symbol 
ID7761901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3106146 
End bp3107258 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content73% 
IMG OID643805873 
ProductGlycosyl transferase, group 1 family protein 
Protein accessionYP_002800141 
Protein GI226945068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCACTGTC TTGAGACCAT CGGCTCCGGC GGCGTCGAAC AGCGCCGCCT GACCCTGGCC 
CGCCGGCTCG ACGGCTCGCG CTACCAGCAG TCGCTGGTCT GCACCAAGGC CGTGGGCGCC
CTGCCGGCGC GCTTCGCCGA GGCCGGCTGT CCGCTGCACG CGGTCGGGGT GTTCCGCGGC
GTGCTGGACC GCGAGCCGTA CCGGCGGGCC CTGCGCGTGG TGCGCGAGTA CCGTCCGCAC
ATCATCCACG GCGCGGTGTT CGAGGGCGTG TCCATGGCCA CGATTCTCGG ACGGCTCTCC
GGGGTGCCGG TGATCATCGG CGAAGAAACC TCCGACCCGG TCGGCCGCCA CTGGCGCGCT
CACTTGCTCT TCCGTCTGCT CGGCACGCTG AGCCACCAGA TGGTGGCGGT GTCCCCCGCC
GTCGAGCGCT ACCTGCTCGA GCGCCTGCAC CTGCCGCGCA GCAAGGTCAC CCTGATCAAC
AACGGCGTGG CCGAGCCGGC GCCGCCCGAC GAGCGGCAGG TGAACGCGCT GCGCGAGCGC
TTCGGGCTGG CCCCGGAGCA CTTCGTGATC GGCACCGTCG GCCGGCTGCT GGACCGCCAC
AAGCGCGTCA GCGACCTGCT CCGCGCGCTG GCCGCGCTGC TTCCGGCCTG CCCGGAGGCG
CGCCTGCTGA TCGTCGGTCG CGGGCCGGAC GAAGGCATGC TGCGCGAACT GGCCGGCCGC
CTCGGGGTCG CCGCCCAGGT GCGCTTCGCC GGCTACCAGG CCGATCCGCA GCCTTGCTAC
GCGCTCATGG ACGTCTTCGC CCTGGCTTCG GCCATGGAGG CCTTCGGCCT GGTGCTGGTC
GAGGCGATGC AGGCCGGCCT GCCGGTGGTG GCGACCCGGG TGGGCGGCAT CCCCGACGTG
GTCGACGAGG GCAAGAGCGG CCTGCTGGTG CCGCCCGCCC GGCCGCAGGC GCTCGCCGAA
GCCATCCTGG AGCTGCGCCG CGACCCGCTC CGGCGCCGGG CCATGGGCCG GGTCGGACAG
CTCCTGGCCA GCACCAACTT CGGCGCGGAA CGCTACGTCC GCGAAGTCGA CTGGCTCTAC
CGGCGTCTCG CCGCGCAGCG CATCGCCTCA TGA
 
Protein sequence
MHCLETIGSG GVEQRRLTLA RRLDGSRYQQ SLVCTKAVGA LPARFAEAGC PLHAVGVFRG 
VLDREPYRRA LRVVREYRPH IIHGAVFEGV SMATILGRLS GVPVIIGEET SDPVGRHWRA
HLLFRLLGTL SHQMVAVSPA VERYLLERLH LPRSKVTLIN NGVAEPAPPD ERQVNALRER
FGLAPEHFVI GTVGRLLDRH KRVSDLLRAL AALLPACPEA RLLIVGRGPD EGMLRELAGR
LGVAAQVRFA GYQADPQPCY ALMDVFALAS AMEAFGLVLV EAMQAGLPVV ATRVGGIPDV
VDEGKSGLLV PPARPQALAE AILELRRDPL RRRAMGRVGQ LLASTNFGAE RYVREVDWLY
RRLAAQRIAS