| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_29910 |
|---|
| Symbol | wbpO |
|---|
| ID | 7761892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3094696 |
|---|
| End bp | 3095973 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643805864 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002800132 |
|---|
| Protein GI | 226945059 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00762868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACTC TGGAAGACCT GAAACTCGCC ATCATCGGAC TCGGTTACGT CGGCCTGCCG
CTCGCGGTCG AATTCGGCAA GCGCCGGCCG GTCGTCGGCT TCGACATCGA CCATGCGCGC
ATCGCTGCCC TCGAGGCCGG GCACGACCGG ACCCTGGAAG TCGACGACCA CGAACTGCGG
GAAGCGCGCC AGCTCCGCTA CAGCGCCGAT ATCGCCAGCC TGGCCGACTG CAACTTCTAC
ATCGTCACGG TGCCGACGCC GATCGACTCG CACAAGAAAC CCGACTTGCT TCCCCTGATC
CGCGCCTCGG AAACCATCGG CCAGGTGCTG AAGCGCGGCG ACATCGTCGT CTACGAGTCC
ACCGTCTATC CCGGCGCCAC CGAGGAAGGC TGCGTTCCCG TGCTCGAACG GGTTTCCGGC
CTGGCGTTCA ACCGCGACTT CTACGCCGGC TACAGCCCGG AACGGATCAA CCCCGGCGAC
CGCGAGCACC GTATCACCGG CATCCGCAAG ATCACCTCCG GCTCCACCCC CGAGGTGGCC
GAACTGGTCG ACGCGCTGTA CCGGGAAATC ATCGCCGCCG GCACCTACAA GGCGGACAGC
ATCCGCATCG CCGAGGCGGC CAAGGTGATC GAGAACACCC AGCGCGACCT CAACATCGCC
CTGGTCAACG AACTGGCGGT GATCTTCAAC CGCATGGGCA TCGACACCGA AGCGGTGCTG
CAGGCGGCCG GCACCAAATG GAACTTCCTG CCGTTCCGCC CCGGCCTGGT CGGCGGCCAC
TGCATCGGCG TCGATCCCTA CTACCTGACC CACAAGGCCG AGGCCATCGG CTACCACCCG
GAAATCATCC TCGCCGGCCG GCGCCTGAAC GACGGCATGG GCGGCTACGT GGTCTCTCAA
CTGATCAAGG CCATGCTCAG GCGGCGCATC CAGATCGACG GCGCCCGCGC CCTGGTCATG
GGCCTGACCT TCAAGGAAAA CTGCCCGGAC CTGCGCAACA CGCGCGTCGT CGACATCATC
CAGGAACTGC GCCAGTACAA CATCTCGGTC GATGTCTACG ACCCCTGGGT CGACGCCGAG
GAAGCCCGGC GGGCCTACGA CATCAGGCCG CTGGACTCAC CGCCGGCCAG CGCCTACGAC
GGCATCATCC TCGCCGTCGC CCACCACCAG TTCCGCAGCA TGGGCGCACC GGGCATCCGC
CGTTTCGGCA AGCCCGGCCA CGTCCTCTAC GACCTCAAGT ACCTGCTCAA GCCCGACGAA
GCGGATCTGC GCCTATGA
|
|---|
| Protein sequence | MHTLEDLKLA IIGLGYVGLP LAVEFGKRRP VVGFDIDHAR IAALEAGHDR TLEVDDHELR
EARQLRYSAD IASLADCNFY IVTVPTPIDS HKKPDLLPLI RASETIGQVL KRGDIVVYES
TVYPGATEEG CVPVLERVSG LAFNRDFYAG YSPERINPGD REHRITGIRK ITSGSTPEVA
ELVDALYREI IAAGTYKADS IRIAEAAKVI ENTQRDLNIA LVNELAVIFN RMGIDTEAVL
QAAGTKWNFL PFRPGLVGGH CIGVDPYYLT HKAEAIGYHP EIILAGRRLN DGMGGYVVSQ
LIKAMLRRRI QIDGARALVM GLTFKENCPD LRNTRVVDII QELRQYNISV DVYDPWVDAE
EARRAYDIRP LDSPPASAYD GIILAVAHHQ FRSMGAPGIR RFGKPGHVLY DLKYLLKPDE
ADLRL
|
|---|
| |