| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_29740 |
|---|
| Symbol | |
|---|
| ID | 7761875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3074152 |
|---|
| End bp | 3075321 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643805847 |
|---|
| Product | Succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_002800115 |
|---|
| Protein GI | 226945042 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCC ATGAATATCA GGGCAAGCAG CTTTTCGCCG AATATGGTTT ACCCGTGTCC
CGAGGCGTTG CCATCGATAC CCCGGAGGCC GCGGCGGAGG CCTGCGACAG GATTGGCGGC
GACTGCTGGG TCGCGAAGGT CCAGGTGCAT GCCGGCGGTC GTGGCAAGGC CGGTGGCGTC
AAGCTGGTCA AGAGCCGGGA GGAGGCGAAG GTCTTCGCCG TCAACTGGCT GGGCAAGCGA
CTGGTGACCT ACCAGACCGA CGCTTCGGGG CAGCCGGTCG GCAAGATCCT GGTCGAGGCC
TGCACCGAGA TCGAGCGGGA GCTTTACCTG GGAGCGGTGG TCGATCGCTC GAGCCGCCGC
ATCGTCTTCA TGGCCTCGAC CGAGGGCGGG GTGAACATCG AGCAGGTCGC CCATGAAACG
CCCGAGAAGA TCCTCAAGGC CAGCATCGAC CCCCTGGTCG GCGCCCAGCC GTTCCAGGCC
CGCGACCTGG CCTTCCGGCT GGGTCTCGAA GGCGATCAGC TCAAGCAGTT CACCCATATC
TTCATCGGTC TGGCCAAGCT GTTCCAGGAG CACGATCTGG CCCTGGTGGA GGTGAATCCG
CTGGTGGTCC AGAAGGACGG CAATCTGCTC TGCCTGGACG CCAAGATCAA TCTCGATACC
AACGCCCTGT TCCGCCAACC CAGACTGCGC GCCATGCACG ACCCTTCCCA GGACGATCCC
CGCGAAGTGC ATGCGGCGAA GTGGGAGCTG AACTACGTGG CCCTCGAGGG CAACATCGGC
TGCATGGTCA ACGGCGCCGG ACTGGCCATG GGCACCATGG ACATCGTCAA TCTCCATGGG
GGCCGGCCGG CCAACTTCCT CGACGTCGGC GGCGGCGCGA CCAAGGAGCG GGTGACCGAG
GCCTTCAAGA TCATTCTCTC CGATGCCAAG GTAAAAGCCG TGCTGGTCAA CATCTTCGGC
GGCATCGTGC GCTGCGACAT GATCGCCGAA GGCATCATCG GCGCGGTCCG GGAGGTAGGC
GTCAAGGTTC CGGTGGTGGT CCGCCTGGAG GGCAACAACG CGGAACTGGG CGCCGAGATG
CTGGCCCGGA GCGGCCTGAA CATCATTCCG GCCAGCACCC TGACCGATGC GGCGGTGCAG
GTGGTCAAGG CAGCGGAGGA CAACCCATGA
|
|---|
| Protein sequence | MNLHEYQGKQ LFAEYGLPVS RGVAIDTPEA AAEACDRIGG DCWVAKVQVH AGGRGKAGGV
KLVKSREEAK VFAVNWLGKR LVTYQTDASG QPVGKILVEA CTEIERELYL GAVVDRSSRR
IVFMASTEGG VNIEQVAHET PEKILKASID PLVGAQPFQA RDLAFRLGLE GDQLKQFTHI
FIGLAKLFQE HDLALVEVNP LVVQKDGNLL CLDAKINLDT NALFRQPRLR AMHDPSQDDP
REVHAAKWEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GRPANFLDVG GGATKERVTE
AFKIILSDAK VKAVLVNIFG GIVRCDMIAE GIIGAVREVG VKVPVVVRLE GNNAELGAEM
LARSGLNIIP ASTLTDAAVQ VVKAAEDNP
|
|---|
| |