Gene Avin_29000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29000 
Symbol 
ID7761803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2993539 
End bp2994957 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID643805776 
Productsigma54-dependent response regulator, two-component 
Protein accessionYP_002800044 
Protein GI226944971 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.99042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCACA GCATTCTGAT CGTCGAGGAT GATGCGACGC TGGCGGGCAA CATTCGCACC 
TATCTGGAGC GCAGGCGCTA CGAGGCGCGG GTCTGCGCTT CGGCCGAGGA GGCCCTGGCC
GTGCTGGAGG AGCAACGGCC CGATGTGCTG CTGACCGACC ATTCGCTGCC GGGAATGAGC
GGGCTGGAGC TGGTCGCCCG GGTGCGCGCC AGCGACCCGC GGATCAAGCC GATCGTGATG
ACCGGCTACG GCAACGTGGA AGACGCGGTG GCGGCGATGA AGGCCGGTTC CTACCACTAC
CTGACCAAGC CGGTGGTACT GGCCGAACTC AAGCTGCTGA TCGACAAGGC GCTCGAAGCC
CAACGGCTGG AGCACGCGCT GTCCTTCTAC CAGGCGCGCG AGGCCAGGGC GGCCGGGCTC
GAGGCGCTGA TCGGCGACTC GCCGGTGATG CACGCACTGA AGACGAAGGT GCGCCAGTTG
CTGGAGGCGG AACGCCGGAT GACCGACGCC GACCTGCCGG TGGTGCTGAT CGAGGGCGAG
ACCGGTACCG GCAAGGAGCT GGTCGCCCGT GCCCTGCATT TCGACGGCGC CCGGCGCCAC
GGCCCCTTCG TCGAAGTCAA CTGCGCCTCG ATCCCGGCGC ATCTCCTGGA GGCGGAGCTG
TTCGGCCACG AGCGGGGCGC CTTCACCGAT GCCAAGGAGC GGCGGGTCGG CCTGGTCGAG
GCGGCGGACG GCGGTACCCT GTTCCTCGAC GAGATCGGCG AGATCGAGCT GTCGCTGCAG
GCCAAGTTGC TCAAGCTGCT GGAGGACCGC AGCATCCGTC GGCTGGGGGC GGTCAAGGCG
CGCAAGGTGG ACCTGCGCAT CGTCGCTGCC ACCAACTGCA ACCTGGAGCG GATGGTGCGG
CAGGGCAAGT TCCGCCGCGA CCTGTTCTTC CGCCTGCGCA TCATCGAACT CAAGGTGCCG
CCGCTGCGCG AGCGCGGCGA GGACGTGATC GCCCTGGCCG AGCACTACCT GGCCCTGCAC
GGCAGGCGCT ACGGCAAGCC GGAATTGGCC TTCAGCGCCC GGGCGCGGGC GCTGCTGAAG
AATTACGACT GGCCGGGCAA CGTGCGCGAG TTGCGCAACA TGCTGGAACA GACCGCGCTG
CTGGCGACGG GCAGGCTGGT CGAGCCGGCG CAACTGGCGC TCTGCCCGGA GCTGATGGAG
AGAGGCGAGC CATGCCCGGC GCCGTTGCGG GAGCCGGGGG CGGCACTGGC GGGAGAGGGG
CTCAAGCTGC CGGAGCTGGA GCGCGATCTA GTGCTGCGCA TGCTGGACAG GACCGACTGG
AACGTGACCA AGTCGGCGCG CCTGCTGGGT CTGACGCGGG ACATGCTGCG CTACCGCATC
GAGAAGCTCG GGCTGTCGCG ACCGGACCGG CGGCACTGA
 
Protein sequence
MEHSILIVED DATLAGNIRT YLERRRYEAR VCASAEEALA VLEEQRPDVL LTDHSLPGMS 
GLELVARVRA SDPRIKPIVM TGYGNVEDAV AAMKAGSYHY LTKPVVLAEL KLLIDKALEA
QRLEHALSFY QAREARAAGL EALIGDSPVM HALKTKVRQL LEAERRMTDA DLPVVLIEGE
TGTGKELVAR ALHFDGARRH GPFVEVNCAS IPAHLLEAEL FGHERGAFTD AKERRVGLVE
AADGGTLFLD EIGEIELSLQ AKLLKLLEDR SIRRLGAVKA RKVDLRIVAA TNCNLERMVR
QGKFRRDLFF RLRIIELKVP PLRERGEDVI ALAEHYLALH GRRYGKPELA FSARARALLK
NYDWPGNVRE LRNMLEQTAL LATGRLVEPA QLALCPELME RGEPCPAPLR EPGAALAGEG
LKLPELERDL VLRMLDRTDW NVTKSARLLG LTRDMLRYRI EKLGLSRPDR RH