Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_28180 |
Symbol | serS |
ID | 7761723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2902799 |
End bp | 2904079 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643805697 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002799965 |
Protein GI | 226944892 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.044076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGACT CCAAACTGGT TCGTACCCAA CTGCAGGAGA TTGTGGGCCG CCTGGCAACC CGTGGCTTCC AACTGGACGT GGCGCGTTTC GAGAGCCTCG AAGCCCAGCG CAAGGCCGTG CAAACCCGCA CCGAACAGCT GCAGGCCGAG CGCAACGCCC GCTCCAAAAC CATCGGCCAG GCCAAGTCGC GCGGCGAGGA CATCGCGCCG CTGCTGGCCG AGGTCGACCG CATGGGCAGC GATCTGGAGG CCGGCAAGCG CGAGCTGGAC GCCATCCAGG CCGAGCTGGA CGCCTTGATG CTGAGCATTC CCAACCTGCC TCACGAGTCG GTGCCGGTCG GCGCCGACGA AGAGGACAAC GTGGAGGTGC GCCGCTGGGG AGTCCCGCGT ACCTTCGATT TCGCGATCAA GGATCACGTC GCCCTCGGCG AGCGCCATGG CTGGCTGGAC TTCGAGACCG CCGCCAAGCT CTCCGGCGCC CGCTTCGCCC TGATGCGCGG CCCCATCGCC CGGCTGCACC GGGCGCTGGC GCAGTTCATG CTCGACCTGC ACACCGGCGA ACACGGCTAC GAGGAAGCCT ACACCCCTTA TCTGGTACAG GCGCCGGCCC TGCAGGGCAC CGGTCAGTTG CCCAAGTTTG AGGAGGATCT GTTCAAGATC AGCCGCGAGG GCGAGGCCGA TTTCTACCTG ATCCCCACCG CCGAGGTATC GCTGACCAAC ATCGTGGCCG GCGAGATCCT CGACGCCAGG CAACTGCCGC TGAAGTTCGT CGCCCATACC CCGTGCTTTC GCAGCGAGGC CGGCGCCTCC GGCCGCGACA CCCGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTGGA AATGGTGCGG ATCGTCGATC CGGCCAAGTC CTACGAGGCG CTGGAGGAAC TGACCGCCAA TGCCGAGAAG GTATTGCAGC GGCTCGAATT GCCGTACCGC GTGCTGGCCC TGTGCACCGG CGACATGGGC TTTAGCGCGA CCAAGACCTA CGATCTGGAA GTTTGGGTGC CGAGCCAGGA CAAGTACCGG GAAATCTCCT CCTGCTCCAA CTGCGGCGAT TTCCAGGCGC GGCGCATGCA GGCGCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAGCTG GTGCATACTC TCAATGGTTC CGGCTTGGCG GTCGGCCGCA CTCTGGTGGC GGTGCTGGAA AACTACCAGC AGGCCGACGG CTCGATCCGC GTGCCCGAGG TGCTCAAGCC CTACATGGGG GGTATCGAGG TCATCGGCTA G
|
Protein sequence | MLDSKLVRTQ LQEIVGRLAT RGFQLDVARF ESLEAQRKAV QTRTEQLQAE RNARSKTIGQ AKSRGEDIAP LLAEVDRMGS DLEAGKRELD AIQAELDALM LSIPNLPHES VPVGADEEDN VEVRRWGVPR TFDFAIKDHV ALGERHGWLD FETAAKLSGA RFALMRGPIA RLHRALAQFM LDLHTGEHGY EEAYTPYLVQ APALQGTGQL PKFEEDLFKI SREGEADFYL IPTAEVSLTN IVAGEILDAR QLPLKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVR IVDPAKSYEA LEELTANAEK VLQRLELPYR VLALCTGDMG FSATKTYDLE VWVPSQDKYR EISSCSNCGD FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG GIEVIG
|
| |