Gene Avin_28180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28180 
SymbolserS 
ID7761723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2902799 
End bp2904079 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID643805697 
Productseryl-tRNA synthetase 
Protein accessionYP_002799965 
Protein GI226944892 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.044076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACT CCAAACTGGT TCGTACCCAA CTGCAGGAGA TTGTGGGCCG CCTGGCAACC 
CGTGGCTTCC AACTGGACGT GGCGCGTTTC GAGAGCCTCG AAGCCCAGCG CAAGGCCGTG
CAAACCCGCA CCGAACAGCT GCAGGCCGAG CGCAACGCCC GCTCCAAAAC CATCGGCCAG
GCCAAGTCGC GCGGCGAGGA CATCGCGCCG CTGCTGGCCG AGGTCGACCG CATGGGCAGC
GATCTGGAGG CCGGCAAGCG CGAGCTGGAC GCCATCCAGG CCGAGCTGGA CGCCTTGATG
CTGAGCATTC CCAACCTGCC TCACGAGTCG GTGCCGGTCG GCGCCGACGA AGAGGACAAC
GTGGAGGTGC GCCGCTGGGG AGTCCCGCGT ACCTTCGATT TCGCGATCAA GGATCACGTC
GCCCTCGGCG AGCGCCATGG CTGGCTGGAC TTCGAGACCG CCGCCAAGCT CTCCGGCGCC
CGCTTCGCCC TGATGCGCGG CCCCATCGCC CGGCTGCACC GGGCGCTGGC GCAGTTCATG
CTCGACCTGC ACACCGGCGA ACACGGCTAC GAGGAAGCCT ACACCCCTTA TCTGGTACAG
GCGCCGGCCC TGCAGGGCAC CGGTCAGTTG CCCAAGTTTG AGGAGGATCT GTTCAAGATC
AGCCGCGAGG GCGAGGCCGA TTTCTACCTG ATCCCCACCG CCGAGGTATC GCTGACCAAC
ATCGTGGCCG GCGAGATCCT CGACGCCAGG CAACTGCCGC TGAAGTTCGT CGCCCATACC
CCGTGCTTTC GCAGCGAGGC CGGCGCCTCC GGCCGCGACA CCCGCGGCAT GATCCGCCAG
CACCAGTTCG ACAAGGTGGA AATGGTGCGG ATCGTCGATC CGGCCAAGTC CTACGAGGCG
CTGGAGGAAC TGACCGCCAA TGCCGAGAAG GTATTGCAGC GGCTCGAATT GCCGTACCGC
GTGCTGGCCC TGTGCACCGG CGACATGGGC TTTAGCGCGA CCAAGACCTA CGATCTGGAA
GTTTGGGTGC CGAGCCAGGA CAAGTACCGG GAAATCTCCT CCTGCTCCAA CTGCGGCGAT
TTCCAGGCGC GGCGCATGCA GGCGCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAGCTG
GTGCATACTC TCAATGGTTC CGGCTTGGCG GTCGGCCGCA CTCTGGTGGC GGTGCTGGAA
AACTACCAGC AGGCCGACGG CTCGATCCGC GTGCCCGAGG TGCTCAAGCC CTACATGGGG
GGTATCGAGG TCATCGGCTA G
 
Protein sequence
MLDSKLVRTQ LQEIVGRLAT RGFQLDVARF ESLEAQRKAV QTRTEQLQAE RNARSKTIGQ 
AKSRGEDIAP LLAEVDRMGS DLEAGKRELD AIQAELDALM LSIPNLPHES VPVGADEEDN
VEVRRWGVPR TFDFAIKDHV ALGERHGWLD FETAAKLSGA RFALMRGPIA RLHRALAQFM
LDLHTGEHGY EEAYTPYLVQ APALQGTGQL PKFEEDLFKI SREGEADFYL IPTAEVSLTN
IVAGEILDAR QLPLKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVR IVDPAKSYEA
LEELTANAEK VLQRLELPYR VLALCTGDMG FSATKTYDLE VWVPSQDKYR EISSCSNCGD
FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG
GIEVIG