Gene Avin_27760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27760 
SymbolrfbC 
ID7761681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp2858205 
End bp2858765 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID643805655 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002799923 
Protein GI226944850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTT TCACAGTTAC TGACTTGCCG CTGGCCGGAT TGAAACTGGT GGAGCGTCGA 
CGCTTCGGGG ATAGCCGCGG TTTTCTGGCC CGTCTGTTCT GCGCGGAGGA GTTGGCTGCT 
ACCGGCTGGC TACAGCCCAT CGCTCAGATC AATCACACCT TCACGACCTG GCGCGGCACG 
GTGCGAGGCA TGCACTTTCA GCGTCCACCT CATGCCGAGG CAAAGTTGGT GACCTGCCTG 
CAGGGAGAGG TTTGGGATGT AGCGGTGGAT TTGCGCGCCG GCTCGCCCAC CTTTTTGCAT 
TGGCACGCCG AGCGGCTTTC GGCGGATAAC GCTCGGGCGC TGCTTATTCC CGAAGGTTTT 
GCCCATGGCT TCCAGACGCT GACCAATGGG GCGGCGTTGC TGTATTGCCA TTCAGCGGCC 
TATGCGCCTG GCGCCGAGGG AGGGCTGCAT CCGCAAGATG AGCGCTTGGG CATCGCCTGG 
CCTTTGGAGA TCAGAGAACT GTCGGTACGA GATGCGATGC ATCCGATGGT CGAGGGTGCA 
TTTGAAGGAG TAGCACTTTG A
 
Protein sequence
MNRFTVTDLP LAGLKLVERR RFGDSRGFLA RLFCAEELAA TGWLQPIAQI NHTFTTWRGT 
VRGMHFQRPP HAEAKLVTCL QGEVWDVAVD LRAGSPTFLH WHAERLSADN ARALLIPEGF 
AHGFQTLTNG AALLYCHSAA YAPGAEGGLH PQDERLGIAW PLEIRELSVR DAMHPMVEGA 
FEGVAL