Gene Avin_27420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27420 
SymbolmtlR 
ID7761649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2816714 
End bp2817613 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content57% 
IMG OID643805618 
Producttranscriptional regulator MtlR (AraC family) 
Protein accessionYP_002799891 
Protein GI226944818 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.467419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA GAGCCAGACG TCAATCATCC CCCTCCTACG AACTGATCAA TCCCAAGGAA 
CACAGCTCGA TCCTCTATCG TGAACATGGC TTCCCGGACC CGCTGGTCTG CTGGCACTAT
CACAAGGAAT ACGAGTTGCA TCTGATTACC CACAGCAGCG GCAAGGTATT CGTCGGCGAC
TATATCGGCA ACTTCTATCC GGGAAATCTG ATTCTGACCG GACCCAACCT TCCGCATAAC
TGGATCAGCC ATACGGAAGA GCAGGATATT TATCCGGAAC GGGACATGGT CGTCGTATTC
ACCGACGACA TGATCCAGAC CGCGCGCAAT GTCCTGCCGG AGTTCACCGA ACTCGACACC
CTGTTACAAC GGGCCAGGTT CGGCATAGAG TTCCAGGGAA ACGACACCAT CGGCGAAGCG
CATCGCCTGA TGCAGAAAAT AGCGACTTCC AGCGGACTGG AGTGCCTGGC CCATTTCCTG
TCGATCATGA GTCTTCTCGC CAAGGCGGAC CGCTACCAAC TGCTGTCCAG CGAGCATTAT
CTGAGCATCG GCGGCGAAAG GAACCAGCAG CGCGTGAACC AGGCGGTCAA CTACATCTTC
GATCATTACC ACGAGAACCT GAGCCTGGAG GAGGTCGCCG AGGAACTCGG CATGCAGCCC
ACTTACTTCT CCAGGTTTTT CCGCCAGGCG ACCGGCCGGC GCTTCGTCGA GTTCGTCAAC
AGCCTGCGCA TCACCCGCGC CTGCGACCTG CTGGCGCACA GCGACCTGCC AATCACCAAT
ATCTGCTTCG AAGTGGGCTT CACCAATATC TCCAACTTCA ATCGCCACTT CATGGCGCTC
AAGGCCATGA CACCATCCGA CTATCGCAAA CTGGCGGGCG TCGCCCGCTG GCTCGCTTAG
 
Protein sequence
MNNRARRQSS PSYELINPKE HSSILYREHG FPDPLVCWHY HKEYELHLIT HSSGKVFVGD 
YIGNFYPGNL ILTGPNLPHN WISHTEEQDI YPERDMVVVF TDDMIQTARN VLPEFTELDT
LLQRARFGIE FQGNDTIGEA HRLMQKIATS SGLECLAHFL SIMSLLAKAD RYQLLSSEHY
LSIGGERNQQ RVNQAVNYIF DHYHENLSLE EVAEELGMQP TYFSRFFRQA TGRRFVEFVN
SLRITRACDL LAHSDLPITN ICFEVGFTNI SNFNRHFMAL KAMTPSDYRK LAGVARWLA