Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_26140 |
Symbol | |
ID | 7761522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2669964 |
End bp | 2671079 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643805492 |
Product | ABC trasporter substrate binding protein |
Protein accession | YP_002799765 |
Protein GI | 226944692 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0025399 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGG TGAGAAAAGG AATCCTGGCT TTCGCGGTCT CGGCCGCGCT GGGCCTGTCC CCGGTGCTCC GGGCCGATGT GCTGATCGGC GTCGCCGGCC CGCACACCGG GCCCAATGCC GCCTTCGGCG AACAATACTG GCGTGGCGCC AGCCAGGCCG CGGCCGACAT CAACGCCACC GGCGGGATCA ACGGCGAGCC GGTCAAGCTG ATCAAGGGCG ACGATGCCTG CGAACCGAAG CAGGCCGTGG CCGTGGCCAA CCGGCTGGTC GACCAGGACA AGGTCGCCGC GGTGATCGGC CACTTCTGTT CTTCCTCGAC CATTCCGGCC TCCGAGGTCT ACGACGAGGG GGGCATCATC GCCATCACCC CCGGCTCGAC CAACCCGCAG GTCACCGAGC GCGGCCTGAC CGGCATGTTC CGCATGTGCG GCCGCGACGA CCAGCAGGGC CAGGTCGCCG CCGACTTCAT CGTCGACACC CTGAAGGGCA AGCGCGTGGC GGTCATCCAC GACAAGGACA CCTACGGGCA GGGCATCGCC GATTCCGCCC GCGCCCAGTT GGCCAAGCGC GGCGTCAGTG CCGTGCTCTA CGAGGGCCTG ACCCGCGGCG AGAAGGATTT CAACGCGCTG GTCACCAAGC TGCGCGGCGC CAACGTCGAC GTGGTCTACT TCGGCGGCCT GCACACCGAG GCCGGCCCGC TGCTGCGGCA GATGCGCGAG CAGGGCCTGA CCGCCAGCTT CGTTTCCGGC GACGGCATCG TCACCGACGA ACTGGTCACC ACCGCCGGCG GTCCGCAGTA CGTCAAGGGC GCCTTCATGA CCTTCGGCGC CGATCCGCGC AAGATCCCCG AAGGCCAAGC GCTGGTCGAG AAGCTGCGCG CCGCCGGCTA CGAGCCGGAG GGCTACACGC TGTATGCCTA CGCTTCGCTG CAGGCGCTGG CCGCGGCCTT CAACGCCACC GGCGGGACCG ACGCGGAGAA GGCCTCCGAA TGGCTGAAGA GCCATCCGGT GACGACCGTG ATGGGGACCA AGGAATGGGA TGACAAGGGC GACCTGAAGG TCAGCGACTA CGTCATCTAC GAGTGGGACG ACCAGGGCAA GTATCATCAG AAGTGA
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Protein sequence | MTMVRKGILA FAVSAALGLS PVLRADVLIG VAGPHTGPNA AFGEQYWRGA SQAAADINAT GGINGEPVKL IKGDDACEPK QAVAVANRLV DQDKVAAVIG HFCSSSTIPA SEVYDEGGII AITPGSTNPQ VTERGLTGMF RMCGRDDQQG QVAADFIVDT LKGKRVAVIH DKDTYGQGIA DSARAQLAKR GVSAVLYEGL TRGEKDFNAL VTKLRGANVD VVYFGGLHTE AGPLLRQMRE QGLTASFVSG DGIVTDELVT TAGGPQYVKG AFMTFGADPR KIPEGQALVE KLRAAGYEPE GYTLYAYASL QALAAAFNAT GGTDAEKASE WLKSHPVTTV MGTKEWDDKG DLKVSDYVIY EWDDQGKYHQ K
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