Gene Avin_25370 details

Gene Information

• Locus tag: Avin_25370
• ID: 7761450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2542667
• End bp: 2543296
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643805421
• Product: Transcriptional regulatory protein, TetR
• Protein accession: YP_002799694
• Protein GI: 226944621
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATCA CGACGCCTAA ACCTCGCCGC GGCCGCCCCC CCAGAATTTC TCGGGATTTC 
CCCGACACCC GCGAGGCGCT GAGTGGAATG GAAATCCTCA CCGAACAGGG CTTCATGTCC 
ACTGGCATCG AGGCGGTGCT CAAGCGCATA GGCGTGCCCA AGGGCTCCTT CTATCACTAC 
TTCGACAGCA AGGAGGCCTT CGGCCAGGCG GTGTTGGAAA ACTATGGCGC CTACTTCGCC 
CGCAAGCTGG ACCGCTGGCT GCTGCAAGAT GACGTGCCAC CGCTGCAGCG TCTGCGCGAT 
TTCGTCGAGG ATTCCAAGGT CGGCATGGCG AAATACGAAT TCCGGCGCGG CTGCCTGGTA 
GGCAACCTCG GCCAGGAGGT GGCCATCCTG CCGGAAAGCT TCCGCACACT GCTGGAAGCC 
ACCCTGTGCG ACTGGCAGCG ACGCCTGGCT GCCTGCCTGC GGCTCGCCCG GGAGCATGGC 
CAACTGGCTG CCGACGCAGC CTGCGAGGAA CTTGCCGCCT TCTTCTGGAT CGGCTGGGAA 
GGTGCCGTGC AACGCGCTCG GATGGTCCGT AACTCGACGC CGCTGGACAT CTTTCTCGAA 
GGCTTTCTCG CCGGATTACC GCGTCAGTGA 

 

Protein sequence

MTITTPKPRR GRPPRISRDF PDTREALSGM EILTEQGFMS TGIEAVLKRI GVPKGSFYHY 
FDSKEAFGQA VLENYGAYFA RKLDRWLLQD DVPPLQRLRD FVEDSKVGMA KYEFRRGCLV 
GNLGQEVAIL PESFRTLLEA TLCDWQRRLA ACLRLAREHG QLAADAACEE LAAFFWIGWE 
GAVQRARMVR NSTPLDIFLE GFLAGLPRQ