| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_25190 |
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| Symbol | |
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| ID | 7761433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2520637 |
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| End bp | 2524227 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643805403 |
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| Product | cyclic di-GMP signal transduction protein |
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| Protein accession | YP_002799678 |
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| Protein GI | 226944605 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.882538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGAG TGCTGATGGT TATGGAGAAT GTGATCGTTG AAGTCGAAGA TGTTCCGCTT
GCCGCGCTGG ATCGGTCCGC ACTGGTTGCC GCGCTGATCG ACGAGCGAAA CCGCGTGGTG
TTTTTCAGTC AGGCTGCGGA ACGGCTATGG GGGCTCGGGC GCGACGAAGT GCTGGGGCGG
GACGCGGGGC TGGTGCTGTC GCCAGGGCTT TCCAGCAGGG GCGATACGCC GTCTTCCGGT
GCCGATCTTC CCGGCTCGGG ACAGACCCTG GCTGTGAAGT GCCGGGACGG TCGGCAGATA
GGCGTTTTCT TCTCTCGGTC GGCCATCGAG ATCGATGGCC GGCTCTTCCA TCTGCTCGTG
GCGCTGTCTC CTGAAGGCAT GCCCGATGGA GTCATGGGCA GGGCGAATCG CCAGTTGTTG
ATGGCGATCG ATCATACCGA CCAGCCAATG CTGGTCTTCA ATGCGCAGCG CCAGATCGTG
CACGTGAACC GTGCCTTCAC CGAATCCTTT GGCTACGAAC TCGGTGAAGT GCTCGGCCTG
GAGCCGATGG CCGTCTTTCC CAGCCCGAAT GTGTCCGCCG AGGACCTTGC GCGGCACCGG
AGCCTGCCGT GGGGACGGGA GCGGTTCCAG ACGGAAATGC TGGTCCGGCG CAAGAATGGA
AGCGACTTCT GGGTTCGCAT ATCGAGTTCG CCATTCGATG GCGACGAGGT CGATGAACTG
AATGGCTACT CGGTGGACGT ATTGGCCGAC ATCACCGAGG AGCGGCAGAT TCGTAGCCTC
GAACATGAGG TACTGGAAGC CCTGACCAGT AGCCTGTCGT TCGAGGAGGT GGGCAACTGC
CTGTGCCGTT GCATCGAAGC CATTGCACCG GGAGTGATCG CTTCGGTGTG GCGGATCGCG
GAAGGGCGTA TCCGGCCGTG GGCCGCGCCG CAATTCCCAC CCGAGTGCAG CGCCGCCTGG
GATGGCGTGG AGATCGGCGA AGGGGTGGCA AGCTGCGGTA CGACCGCTTA CCGCGGCGAG
CCGGTGATGG TTCGCGACAT CGCTTCCGAC GCTTTGTGGG CGTCGTACAA ACACCTGATC
CTGCCCTATG GCCTGCGGGC TTGCTGGAGT TATCCGGTGA AGCGGCGCGA TGGCAGCGTG
GCCGGTACCT TCGCCTTCTA TTTCAGGGAG GGGGGCGGGC CCGATTCCCA TCTGGAACGC
ATCGCCGAAG CCAGTGTGCA TCTGTGCGCG CTGGCGATCG AACGGGAGGA GGATCGCCAG
CAGATGAACC GTCTGGTTCA ACTCGACACG CTGACCGGCC TGCCCAATCG CAGCCATCTG
CTGCGTCGCA TCGATGAGCT GCTGGTATCG GCGACATGGG GCGACATCGC TTGCTTCAAT
CTGGGTCTGG ACCGTTTCAA GGATATCAAC GAAGCGCTGG GTCATGCTGA AGGCGATCAG
GTACTGGTGG CGATGGCCAA CCGGCTTCAG CGGCATCTGA GGCCCGGTCA GTTCCTCAGC
CGCTCGGAGG GTGACCTGTT CGTCGTTGTC GCGCCCGATT GTGACGTCCG CAGCGCATCG
CTGATGGCGG AACGACTCCT GCAAACCGTC GCCGAGCAGA TCGAGGTCGG CGGTCATGCG
TTGAACCTGT CCGCCAGCGT GGGTATCAGC CTCTACCCGG AGGGCGGCCA GGATCGGGAT
GCCCTGCTCG CCAACGCCAA GAGCGCGATG TACCGCGTCA AGCGAACGGG CGGTGGCGGC
TACCAGTTCT TCATCCCGGA AATGAACCGT GCGCTGCAGG ATCGCTTGTT GCTGAGCGCC
GCGCTCAAGC GTGCCATCGC CGGCGATGGC CTGAGCCTGC ACTATCAACC CCAGGTGCAT
ACCGTGAGTG GCGAACTGTA CGGTTTCGAG GCGCTGGCGC GCTGGCACGA CGACGAATTC
GGCGACATTC CACCGACGAA GTTCATCGGC CTGGCCGAGG AGACGGGCCA GATCGAGGCC
ATCGGCCGCT GGGCTCTGCG TGAGGCCTGT CGGCAACTGG CGGAGTGGCG GGAGGGGGGA
GCCATGGTAC CGACGGTGTC GGTCAATCTG TCGCCGATCA ACTTCCATAG CCGGGATCTG
CCGGAGTTCG TGGCCGGCTT GTTGCGCGAG TTCGCACTGC CAGGCGCCAG CCTGACCATC
GAGATCACCG AAAGCACGAT GATGGCGCTG ACCCCGGAGA TGCTGGATAT CGTGCACGGC
ATCCGTTCGC TCGGAGTCGG TTTGTCGGTG GATGATTTCG GCACCGGCTT TTCCAGCTTG
TCCAACCTCA TCAATCTGCC GGTGACCGAA GTCAAGATCG ACCGCAGTTT CATCGACAAG
TGCCTGGAGG AAAACCGCCT GCAATCCCTG GTGGCGGCAG TAGTCGGAAT CGGGCACAGC
CTGGACCTCA CCGTCGTGGC CGAGGGGGTC GAGACCCGCG AACAGCGCGA CCTGCTCGGC
GAATACCGTT GCCCGGTGCT TCAGGGCTAC ATTTTTTCGC GCCCAATGAG CCCCTGTGAG
GCCATTAAAT GGCTTTTTGA TTGGGGGGGG GGGGGGGGGG GGGGGGGGGC GAGCCTCTTG
GAGGGCTGTC GTAGGGGCTT GCAGGGGGAT TCCTGGTGGT GTCGGGAGGG GGGCGTGAGG
TCTTGGCTGA AGGTGTTCTA CCCGGTATTG CCCCGCGTCC TCGATGCGTT GCCTTTCGCC
GTGTCGTGGG CTGCGATACC GGGTGCCCAT ATCCAGTACG GCAATCGGGC GTTCGACCAG
TTATTCGGCT ACCCGTCCGG TCATTTCCGG ACGGCGGACC AACTGATCGA GGAAGCCTAC
ATTCATGAAC GACAGCGCAA GCTGTTGCGC AGGCTCTGGA ACGATTTCGC GTTGCCGGGC
GATGCGTCGG GGCCGATGAG CATTCCCGAG ATCGAGGTCG ACATCCTGGC TGGGGACGGT
CAGATACGGA CAGCGCTGCA TTGCGGGCTG ATCCTGCCCG AGCAAAGGGT GGCGGTCGCC
TTCTACAAGG ATATATCCGA CTTCAAGCGC GACAGCCGGC TGCTGAGGGA GTACGCCTTT
CTCGATCCGC TGACCAAGGT CGCCAACCGG CGCGGTCTGC AAGAGTGGTG GCGCAACGAA
ACCTCCGGTG GCCGCCAGCG GCGTCTCGCT TTCCTGATGG TGGATCTGGA TGGTTTCAAG
CCGATCAACG ATACGCATGG CCATGATGTT GGCGATGCCG CCCTGTGCAT GGTCGCAGAC
AGGCTCAAGG CCGTGGTAAG GGATACCGAT CTGGTGTGCC GGCTCGGTGG AGACGAATTC
GGGCTGGCAA TGGTCGAGGT GGAAGGTTGC GGGCAAATGG AAGCGATCTG CGAGCGCATC
GTCGCTTCGC TCGGCGAGCC AATGGATATT GGTGGTTCGA GCGTACGTAT CTCGGCCAGT
GTGGGCGGTT GTCTCTATCC CGATCAGGCC GCCGACAAAC GCGAATTGCT GCAACGCGCG
GATCGGGCGT TGTATCGGGT CAAGAAAGCC GGAAAGAGCG GATGGGGCTG GTGGGAGCCC
GAGCAGCGAA AAACGGCGCG GAGCCTGTCT GAAAAGAGCG AACGGGAGTG A
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| Protein sequence | MERVLMVMEN VIVEVEDVPL AALDRSALVA ALIDERNRVV FFSQAAERLW GLGRDEVLGR
DAGLVLSPGL SSRGDTPSSG ADLPGSGQTL AVKCRDGRQI GVFFSRSAIE IDGRLFHLLV
ALSPEGMPDG VMGRANRQLL MAIDHTDQPM LVFNAQRQIV HVNRAFTESF GYELGEVLGL
EPMAVFPSPN VSAEDLARHR SLPWGRERFQ TEMLVRRKNG SDFWVRISSS PFDGDEVDEL
NGYSVDVLAD ITEERQIRSL EHEVLEALTS SLSFEEVGNC LCRCIEAIAP GVIASVWRIA
EGRIRPWAAP QFPPECSAAW DGVEIGEGVA SCGTTAYRGE PVMVRDIASD ALWASYKHLI
LPYGLRACWS YPVKRRDGSV AGTFAFYFRE GGGPDSHLER IAEASVHLCA LAIEREEDRQ
QMNRLVQLDT LTGLPNRSHL LRRIDELLVS ATWGDIACFN LGLDRFKDIN EALGHAEGDQ
VLVAMANRLQ RHLRPGQFLS RSEGDLFVVV APDCDVRSAS LMAERLLQTV AEQIEVGGHA
LNLSASVGIS LYPEGGQDRD ALLANAKSAM YRVKRTGGGG YQFFIPEMNR ALQDRLLLSA
ALKRAIAGDG LSLHYQPQVH TVSGELYGFE ALARWHDDEF GDIPPTKFIG LAEETGQIEA
IGRWALREAC RQLAEWREGG AMVPTVSVNL SPINFHSRDL PEFVAGLLRE FALPGASLTI
EITESTMMAL TPEMLDIVHG IRSLGVGLSV DDFGTGFSSL SNLINLPVTE VKIDRSFIDK
CLEENRLQSL VAAVVGIGHS LDLTVVAEGV ETREQRDLLG EYRCPVLQGY IFSRPMSPCE
AIKWLFDWGG GGGGGGASLL EGCRRGLQGD SWWCREGGVR SWLKVFYPVL PRVLDALPFA
VSWAAIPGAH IQYGNRAFDQ LFGYPSGHFR TADQLIEEAY IHERQRKLLR RLWNDFALPG
DASGPMSIPE IEVDILAGDG QIRTALHCGL ILPEQRVAVA FYKDISDFKR DSRLLREYAF
LDPLTKVANR RGLQEWWRNE TSGGRQRRLA FLMVDLDGFK PINDTHGHDV GDAALCMVAD
RLKAVVRDTD LVCRLGGDEF GLAMVEVEGC GQMEAICERI VASLGEPMDI GGSSVRISAS
VGGCLYPDQA ADKRELLQRA DRALYRVKKA GKSGWGWWEP EQRKTARSLS EKSERE
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