Gene Avin_23650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23650 
SymbolphbB 
ID7761281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2370419 
End bp2371162 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID643805250 
ProductAcetoacetl-CoA reductase in PHB biosynthesis 
Protein accessionYP_002799528 
Protein GI226944455 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATC AACGAATTGC ATTCGTCACG GGCGGCATGG GCGGAATCGG GACAGCAATC 
AGCCGGCGCC TCTACAAGGA AAACTTCACC GTGATCGTCG GGTGCACTCC GCAATCCAAA
CGCAAAGATG GATGGCTCGC GGCCCAGCGC GATAGCGGCT TCACTTTTGA AGTCTGCGAA
CACGACGTAA CCGATTGGGA GAGCACTCAG CGTGCCTTCG CCGAGTTGCG CGAACGTGTG
GGGACCATTG ACGTATTGGT GAACAATGCC GGTATCACCC GGGATGCCAG CTTTCGCAAG
CTCACTCCGG AAAACTGGCA AGCAGTGATC AACACCAACC TCAATGGCTT GTTCAATACC
ACCAAGCAAG TCATCGAAGA CATGCTCGGC AAGGGCTGGG GCCGCGTTAT CAATATTTCG
TCGATCAACG GGCAGCGTGG CCAGTTCGGT CAGACCAACT ACTCTGCCGC CAAAGCGGGC
ATCCACGGCT TCACCATGGC CCTGGCTCGC GAAGTGGCCA GCAAGGGCAT AACCGTCAAC
ACCATCTCTC CCGGCTACAT CCTCACCGAA ATGACCGGCG CCATGCGGCC GGAAGTTCTC
GAGCAGATCA CTGCCGGCAT TCCGGTCGGC CGCCTCGGCC AGCCCGAGGA AATCGCCAGC
ACGGTCGCCT GGTTGGCCTC CGAGGAAGCG GCCTATGCCA CCGGCGCCGA CTTTTCCATC
AACGGCGGTC TGAACATGCA ATGA
 
Protein sequence
MSNQRIAFVT GGMGGIGTAI SRRLYKENFT VIVGCTPQSK RKDGWLAAQR DSGFTFEVCE 
HDVTDWESTQ RAFAELRERV GTIDVLVNNA GITRDASFRK LTPENWQAVI NTNLNGLFNT
TKQVIEDMLG KGWGRVINIS SINGQRGQFG QTNYSAAKAG IHGFTMALAR EVASKGITVN
TISPGYILTE MTGAMRPEVL EQITAGIPVG RLGQPEEIAS TVAWLASEEA AYATGADFSI
NGGLNMQ