| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_22710 |
|---|
| Symbol | |
|---|
| ID | 7761189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2265282 |
|---|
| End bp | 2267441 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643805156 |
|---|
| Product | heavy metal translocating P-type ATPase protein |
|---|
| Protein accession | YP_002799437 |
|---|
| Protein GI | 226944364 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGCG CCTGGTTCGT CCGGCTGCGG CCGCTGCACC GCACGCCCGG TCGGGTGCGC
TATCGCTACC GCTGCCGGGC GGGAACGCCG CTGGACGCGC ACAGCATCGA GCACGAGATC
GCGACCCTCA AGGGCGTGCT GCAGGCGCGC GCCAATCCGG CGGCGCGCTC GTTGGTGGTG
GAGTTCGAGC CGGGCGTCGT CGATCCCGAC GGCCTGGCCG CCGCCATTCT CGCGCTCTCG
CCCTCGGGGC TGCCCTTGTC GGCCACCAAT CATCGGTACA GCGAGGCCGC GCGCCTGGGG
GCGGTGGCCA TGAGCGGCGC CACCCTGCTG GTCGGCCGCA GCCTGCAACC GGGCCTGCAG
GCGCCGGTCG CCTTCGGCGC CGCCGTGCCG CTGCTCGGCG AGGCGGTCGA CGATTTCCTC
GAGAAGGGCA TCACCTCCCA TGTGCTGGAG GCCCTCGCCG TGGGCATCTC CATCGGCCGC
AGCGACTTCC TGGCGGCCAA CACCACCTCC TTCCTGCTGG CCCTGGGCGA ATACCTCGAA
GAGTCCATCG AGCACCGTTC GGACGAATTG CTCAAGCACC TGCTGCGCCC GCCGGGCGGC
GAGGTGTGGG TCGAGCGCAA CGGCGTCGAG ACGCTGATCG ACGCCGCCGA GGTGCAGGTC
GGCGACAGCG TGATCGCCGC CACCGGCACC GTGATTCCGG TGGACGGCAC CGTGCTCGGC
GGCGAGGCCC TGGTGAACGA GGCGACCATG ACCGGCGAGA GCGTGCCGGT GGTGCGCCGG
CGCGGCGACC GGGTGCTGTC GGCGACCCTG ATCGAGGAGG GCCGCCTGCG CATCTACGCC
GAGCGGGTCG GACGCCAGGC CGCCGCCGCG CGGATCGCCG ACTTCGTCGA GCAGTCGCTG
TCGGTGAAGA GCGAGACCCA GCTCGAAGCC GCGCGCCTGG CCGACCGCCT GGTGCCGATG
GTGCTCGGCC TGGCCGGCCT CACCTGGCTG CTGAGTTCCG ACGGCCAGCG GGTCGCGGCG
GTGCTGCAGG CCGACTATTC CTGCGCCCTC AAGCTGGCCA CGCCGGTGGC CTTCAAGGCG
GCGATGTACC GCGCCGGCCA GTCGGCGATC CTGATCAAGA GCGCCAAGGC CCTGGAGCGC
CTGGCCCGCG CCGATACTTT CGTCTTCGAC AAGACCGGCA CTCTGACCAC CGGCGTGCTC
CAGGTGACCG ATTCGATCGC CTTCAGCGCC GCCTATAGCG CGGAGGACGT GACCAACCTG
GCCGCCTCGG TGGAAGAGCA CTACTTCCAT CCGGTCGCCG AGGCGGTGGT GGCGGCCTCC
CATCGTCTCG GCCATCCGCA CCACTTCGCC CACCAGGCGG TGCAGTTCGT CGTCGCCCAT
GGCGTGGCGA GCGTGATCGA CGGCAAGCGC ATCGTGGTCG GTTCGCGGCA CTTCGTCGAG
GACGACGAGG GCATTTCCGT CGCCGCCCAT GCCGAGGTGA TCGAGCGTTT GCGCGGCGAG
GGCAAGACCC TGCTCTACAT CGGCTTCGGC GGCGAACTGA TCGGCGTCCT GGGCCTGACC
GAACAGGTGC GCGACAATGC CGCCCAAACC GTGGCCCGCC TGCGCGAACT GGGCGCCAGG
CGCATCCTGA TGCTCACCGG CGACCAGCCG GAGCGGGCCC GCGCGCTGGC CGAGGAACTG
GGGCTCGACG AATTCCGCGC CGGCCTGTTG CCGGAGCAGA AGGCCGAGGT GCTGCAGCAG
CTCGCCGCCG AGGGCGCGCG CATCGCCTTC GTCGGCGACG GGGTGAACGA TGCGCCGGCG
CTGAGCGGCG CCCTGGTCGG CATCGCCATG CACCACGGCG CCGACATCGC CCGCCTGGCC
GCCGATATCA CCCTGCTGGA AGACGACTTT TCCCGGGTCG CCGACGCCCT GGCCCTGGCC
CTGGCGACAC GGCGGCTGAT CGACGGCAAC TTCAAGCTCA CCGCCGGGCT CAACACCAGC
ATCCTCGGTG CGGCGGCCTT CGGCCTGCTG ACCCCGGTGG CCGCCTCGAT GCTGCACAAC
GGCAGCACCC TCGCCATCCT TTTGCGTGCG CTGGCCGGCG CCGGCCTGCC GCGCGAGAGC
GGAGGACGGG CGAAACGCCG CGCCGCGGGG CCGGCCCTAT CGCCACGGGC CACCGACTGA
|
|---|
| Protein sequence | MEGAWFVRLR PLHRTPGRVR YRYRCRAGTP LDAHSIEHEI ATLKGVLQAR ANPAARSLVV
EFEPGVVDPD GLAAAILALS PSGLPLSATN HRYSEAARLG AVAMSGATLL VGRSLQPGLQ
APVAFGAAVP LLGEAVDDFL EKGITSHVLE ALAVGISIGR SDFLAANTTS FLLALGEYLE
ESIEHRSDEL LKHLLRPPGG EVWVERNGVE TLIDAAEVQV GDSVIAATGT VIPVDGTVLG
GEALVNEATM TGESVPVVRR RGDRVLSATL IEEGRLRIYA ERVGRQAAAA RIADFVEQSL
SVKSETQLEA ARLADRLVPM VLGLAGLTWL LSSDGQRVAA VLQADYSCAL KLATPVAFKA
AMYRAGQSAI LIKSAKALER LARADTFVFD KTGTLTTGVL QVTDSIAFSA AYSAEDVTNL
AASVEEHYFH PVAEAVVAAS HRLGHPHHFA HQAVQFVVAH GVASVIDGKR IVVGSRHFVE
DDEGISVAAH AEVIERLRGE GKTLLYIGFG GELIGVLGLT EQVRDNAAQT VARLRELGAR
RILMLTGDQP ERARALAEEL GLDEFRAGLL PEQKAEVLQQ LAAEGARIAF VGDGVNDAPA
LSGALVGIAM HHGADIARLA ADITLLEDDF SRVADALALA LATRRLIDGN FKLTAGLNTS
ILGAAAFGLL TPVAASMLHN GSTLAILLRA LAGAGLPRES GGRAKRRAAG PALSPRATD
|
|---|
| |