Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_22450 |
Symbol | |
ID | 7761163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2244467 |
End bp | 2245735 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805130 |
Product | OprD family outer membrane porin |
Protein accession | YP_002799411 |
Protein GI | 226944338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG CTCCCAAACC CTCTCTGCAG GCTCGCCCCC ATACTCTCGT CCTGCCCCTG ATTCTGGCGG GAGCCCTGCC AACCGCCCAG GCCGAACTCC TCGAGGATGC CAAGGGCACC CTGACCCTGC GCAACTTCTA CATCCACCGC AACTTCGTCG ACGACCGCGC CACCCGCAGC AAGGCCGAGG AATGGACCCA GAGCTTCATC CTCGACCTGC AGTCCGGCTA CACCGAAGGC CCGGTCGGCT TCGGCATCGA CATCCTCGGC CTCCGGTCGG TCAAGCTCGA CGGCGGCAAG GGCACCGGCG GCACCCAGCT TTTGCCCGTC GGCAAGGACG GCAAGCCGGC CGACGACTTC GGCCGCCTGG CGGTGGCCGG CAAGCTGCGC TTCTCGAAGA CCGAGGCGAA GCTCGGCGAG TGGTCGCCGG CGCTGCCGAT CCTGCGCTCC GACGACGGCC GCTCGCTGCC GCAGACCTTC CAGGGCGGCA TGTTCACCTC CAAGGAGGTC CGCAACCTGA CCCTCTACGG CGGGCGCTTT CGCGGCAACA GCCCGCGCGA CGACAGCAGC CTCGAGGACA TGAGCTGGGT CGGCAACGCC AGCGTCACCT CCGACCGCTT CAGCTTCGCC GGCGCCGAAT ACGCCTTCAA CGACAACCGC ACCCAAATCG GTGCCTGGTT CGGCCAACTG GAGGACATCT ACAAGCAGCG CTACTTCCAG GTGCTGCACA GCCAGCCGCT GGGCAAGGAC TGGACCCTGG GCGCCAACCT CGGCTACTTC GACGGCGAGG AGGACGGCAG CGCCCAGGCC GGCGACCTGG ACAACAGCCT GCTGACCGGG ATGTTCTCGC TCAAGCATGG CGCGCACATC TTCTACCTGG GCCTGCAGCG GGTCGGCGGC GACGACCGCT GGCTGCGGGT CAACGGCACC AGCGGCGGCA CGGCGGCCAA CGACAGCTAC AACGGCAGCT TCGACAACCC CCGCGAGCGC TCCTGGCAAG TGCGCTACGA CTACGACTTC GCGCCCCTGG GGATGCCCGG CCTGACCCTG ATGACCCGCT ACATCAAGGG TCACAACGTG CATGCGGGCG GTATCGACGA CGGCGAGGAG TGGAACCGCG AGACCCAGTT GAGCTACGTG GTGCAGAGCG GTCCGGCGAA GAACCTGGCC CTGCGCTGGC GGAACTCGAC GGTGCGCCGC GACTGGGGCG CCGACAACAA GTTCGACGAC AACCGGCTGA TCGTCCAGTA TCCGCTCTCG CTGTTCTGA
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Protein sequence | MKNAPKPSLQ ARPHTLVLPL ILAGALPTAQ AELLEDAKGT LTLRNFYIHR NFVDDRATRS KAEEWTQSFI LDLQSGYTEG PVGFGIDILG LRSVKLDGGK GTGGTQLLPV GKDGKPADDF GRLAVAGKLR FSKTEAKLGE WSPALPILRS DDGRSLPQTF QGGMFTSKEV RNLTLYGGRF RGNSPRDDSS LEDMSWVGNA SVTSDRFSFA GAEYAFNDNR TQIGAWFGQL EDIYKQRYFQ VLHSQPLGKD WTLGANLGYF DGEEDGSAQA GDLDNSLLTG MFSLKHGAHI FYLGLQRVGG DDRWLRVNGT SGGTAANDSY NGSFDNPRER SWQVRYDYDF APLGMPGLTL MTRYIKGHNV HAGGIDDGEE WNRETQLSYV VQSGPAKNLA LRWRNSTVRR DWGADNKFDD NRLIVQYPLS LF
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