Gene Avin_21970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21970 
Symbol 
ID7761115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2195625 
End bp2196617 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID643805082 
ProductABC transporter, taurine periplasmic binding protein 
Protein accessionYP_002799363 
Protein GI226944290 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.6913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA GATCCCTGCT GCAAGGCGCC CTGGCCCTGG GCGCCGCCGC CTCGCTGCCG 
TCCCGGCTGC TCGCCGCGCC GCGCGAGAAG CTCAAGGTCG GATACCTGCA CACCCTGTCC
GCCGACGCCC ACTTGTGGCT GGGCGAGCAC CTGGGCGCCT GGTCCGCACA GGCCATCGAG
ATCGAGCCGA TACGCTTCGT CACCGGCCTG GAGGCCTACC AGGCGCTGGC CGGTGGCAGC
GTCGACCTGG TGACGACCGG CGCGGTCATC TCCAACTTCC CGGCGCGCGG CCAGGGCAAG
GCGTTCCTGG TCAACGCGCT GGAAACCGGG ATCGCGCAGA TCTGGGCCGA TCCGGCGGCC
GGCATCCGCT CGCTGGCCGA CCTCAAGGGC CGGCAGGTCG CCACCACGCG CGGCACCACC
GCCCACTTCT TCCTGCACCG CGCGCTGCTC GCCGCCGGGC TGGACAGCAC CAAGGACGTG
GAAATCGTCC ACCAGCGCCT CGACCAGGCG GTGACCTCGT TCATCGCCGG CTCGGTACCG
GCGACCTCCC TGTGGGTGCC CTTCGACGTG CCGATCCGCC AGCGCCGGCC GCAGGCCGCA
TTGCTGGCGC AGTCCGGCGA CTACCCGGAC GCCACGGTGG TGGACGGCTG GTCGGCGCGC
AACGAGCTGC ACGCCAGCCG GCCCGATCTG CTGCAACGCT TCATCCGCGG CTGGGCACGG
GCCAACGACC TGCTGGTCGA GCAGCCCGAC GAGGCGCTGA AGATCCTCGC CGCGAGCCAC
TACAAGGAAT TCGACTTGGC GGAACTGCGC CGCCAGCACG CGCTGATCAC CTGGTACCCG
AGCCGCGAAT GGCCGCGTTA CTACCGCGAC GGTTCGGTGC AAGCCTGGCT GGACCGGGTG
ACCGCCTTCA ACCGCGAGGT CGGGGCGATC CAGGACCCGC TGCCCGCCGC CCGCTACTTC
GATCCGCAAC CCTTCCTCGA TGTCTTCGCC TGA
 
Protein sequence
MKRRSLLQGA LALGAAASLP SRLLAAPREK LKVGYLHTLS ADAHLWLGEH LGAWSAQAIE 
IEPIRFVTGL EAYQALAGGS VDLVTTGAVI SNFPARGQGK AFLVNALETG IAQIWADPAA
GIRSLADLKG RQVATTRGTT AHFFLHRALL AAGLDSTKDV EIVHQRLDQA VTSFIAGSVP
ATSLWVPFDV PIRQRRPQAA LLAQSGDYPD ATVVDGWSAR NELHASRPDL LQRFIRGWAR
ANDLLVEQPD EALKILAASH YKEFDLAELR RQHALITWYP SREWPRYYRD GSVQAWLDRV
TAFNREVGAI QDPLPAARYF DPQPFLDVFA