| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_21910 |
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| Symbol | asfC |
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| ID | 7761109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2187847 |
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| End bp | 2188836 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643805076 |
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| Product | ABC transporter, substrate-binding protein, aliphatic sulphonate |
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| Protein accession | YP_002799357 |
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| Protein GI | 226944284 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.58658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG CTAGCCGTCT CTGTCTCACC CTGGCCGGGC TGCTGTCCTG CTCGGGAATC
GCCTGGGCGC AGAACCTGCA AGCCCTGCGG GTGGCCAATC AGAAATCCGG CATCAAGCTG
CTCCTGGAGG CGGCCGGGGA ACTGCAAGAG GTGCCCTACG CCATCCAGTT CTCCGAATTT
CCGGCGGCCG CGCCGCTGGG CGAGGCGCTG AACGCCGGCG CGGTGGATGT CGGCGGCCTG
GGCGACGCGC CCTACGTTTT CGCCCTGGGC AGCGGTGCAG CGCTGAAGGT CGTCTGCATC
GTCCATGCGG CCGGCCGCCT GAGCACGGCG ATCATCGTGC CCAAGGACTC GCCCCTGCAC
GGCGTCGCCG ACCTGAAGGG TAAGCGCATC GTCACCGGAC GCGGCTCGAT CGGGCATTTC
CTGGCGCTCA AGGCCCTGCG CGAGGCGGGA CTGCAAAGCA GCGACGTACG CTTCGTCAAC
CTGCTGCCCA GCGACGCGCG CAGCGTCCTG GAGAGCGGCG GCGCCGACGC CTGGTCGACC
TGGGACCCGT ACACCGCCAT CGCCATCACC CAGGGCGCCC GGGTGCTGGT CAACGGCAGC
CACCTGCTCA GCAACAACTT CTATCTGGCG GCGACCGCCC AGGCCATCGA GGACAAACGC
CCGCAACTCA CGGACTTCGT GAAGCGGCTG GAGCGCGCCT ATCGATGGGC CAACCAGCAT
CCGGACGCCT ACGCCGCCGC CCAGTCCAGG GTCACCGGCC TGTCCCGCGA GACGCACCTG
GAGTCGGCCA GGAATACCCG TTTCCAGCGG GTCCCGATCG ACGATGCGCT GATCGAGGGT
CTGCAGGCGA CCGCCGACCT GTATTTCGAG GAAGGCATCA CCGGCAAGCG AATCGAGGTT
TCGCAGGGCT TCGACAGGAG TTTCAACGAG GCGGCCGACG GACCGCTTCT ACCCGCCCCG
TCCCGGGTCC AGGCCTCCGG CCGCCCATGA
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| Protein sequence | MKNASRLCLT LAGLLSCSGI AWAQNLQALR VANQKSGIKL LLEAAGELQE VPYAIQFSEF
PAAAPLGEAL NAGAVDVGGL GDAPYVFALG SGAALKVVCI VHAAGRLSTA IIVPKDSPLH
GVADLKGKRI VTGRGSIGHF LALKALREAG LQSSDVRFVN LLPSDARSVL ESGGADAWST
WDPYTAIAIT QGARVLVNGS HLLSNNFYLA ATAQAIEDKR PQLTDFVKRL ERAYRWANQH
PDAYAAAQSR VTGLSRETHL ESARNTRFQR VPIDDALIEG LQATADLYFE EGITGKRIEV
SQGFDRSFNE AADGPLLPAP SRVQASGRP
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