Gene Avin_21640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21640 
Symbol 
ID7761084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2164935 
End bp2165921 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID643805052 
Productnitrate/sulfonate/bicarbonate ABC transporter, substrate binding protein family 3 
Protein accessionYP_002799333 
Protein GI226944260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.800377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGATG AATATCCTTC GATGAATCGC CGTCGCATCC TGTTGACGGG AAGCCTGCTG 
GCGGGGGCGG CGCTGGCGAG CCGCTGGGGC GTGGCCGCGA GCGGCCCGCT GGATCTGTCC
CGCACCCGGT TGGGGGTCGG TACCTACAAG GGCGCCGCGC CTTCCTTTTT CGAGGAAGCC
GGTGTGGCGC CGCCTCCCTA TGAAGTCAGC TACGCGGAAC TGGCCGGCGG CAATCTGATC
GTCGAGGCAC TGGCCGCCGG CAGCCTGGAT GTCGGCAGCA TGAGCGAAAT CCCGCCAGTG
TTCGCCATCC GGAGCCGGGC GCCCATCAAG CTGATCGCCG TGCTGCGTGG CGACGTGAAC
AATCAGGTCT TCCTGGTGCC GCGGGGCTCC GGCATCCGGG AGATCGCCGA ACTGAAGGGC
AAGCGCGTCG GCTTCGTGCG TTCGACGACG TCCCACTACT TCCTGATCAA GGCCTTGAAG
GAGCAGGGCC TGAGCCTGGC CGACATCGAG CCGGTGGGGC TGACGCCGCA GGACGGCTTT
TCCGCCTTCC AGAGCGGACA ACTGGATGCC TGGGTGATTT ATGGCATCCA TATCCAGATC
GCGCTCGCCA GGACCGGCGC GCGCATCATC AAGACCGCGC TGGGTTATCT GTCGGGCAAT
TACGTGATCG CCGCCCGCGC CGAATCCCTG AAGGACCCCT ACCGGGTCGC GGCGATCAAG
GATTATCTGG CGCGGGAACA GCAGGTATGG GACTGGGTGC AGGCCAACCC GGAGCGCTGG
GCGAAGAAAA GCGCGGCGAT CACCGGCATC GACGCTTCCC TGTTCATGGA TCAGTTCCGG
GCACACAGCG AGCCTTATCG CATGGTTCCC GTCGACGACG CGGCGATCGC TTCCCAGCAG
GAGGTGGCGG ATCTGTTCCA CGAGGCCGGC GTACTGGACC AGCGGCTGGA TGTCGCCCCC
CTGTGGACCA GGGACGTCTG GCCCTAA
 
Protein sequence
MPDEYPSMNR RRILLTGSLL AGAALASRWG VAASGPLDLS RTRLGVGTYK GAAPSFFEEA 
GVAPPPYEVS YAELAGGNLI VEALAAGSLD VGSMSEIPPV FAIRSRAPIK LIAVLRGDVN
NQVFLVPRGS GIREIAELKG KRVGFVRSTT SHYFLIKALK EQGLSLADIE PVGLTPQDGF
SAFQSGQLDA WVIYGIHIQI ALARTGARII KTALGYLSGN YVIAARAESL KDPYRVAAIK
DYLAREQQVW DWVQANPERW AKKSAAITGI DASLFMDQFR AHSEPYRMVP VDDAAIASQQ
EVADLFHEAG VLDQRLDVAP LWTRDVWP