Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_20970 |
Symbol | rhdE |
ID | 7761022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2092457 |
End bp | 2092981 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643804992 |
Product | Rhodanese-like protein |
Protein accession | YP_002799273 |
Protein GI | 226944200 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00660232 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCG CTACCCCAGT CCGCCATGAA GCCGCCGAGG ACGTCCGGCG TCCCGTCGAT CTGTCCGAGG TACTCGCCGC CAGTCCGGCG GAGTTGCTCG CCAGGGCGCG TGCCCGAGGT GTCGACGGCG GTCTCGCCTA TGCCGGCAGT CTCTACCCGC CGGAGGCCTG GGCGCTGCTG CAGGCCGGTG CGGCGATCCT GGTGGATGTG CGCAGCGCCG AAGAGCTGAA GTTCGTCGGG CGTGTGCCGG ACACCCTGCA CGTGGCCTGG CAGAGCGGCC CGACGCTGAT CAAGAACCCG CGCTTTCTCA TCGAGCTGGC CGGCAAGGCC GGGCGCGACA AGGTGCTGGT GCTGCTCTGC CGCAGCGGCA AGCGTTCCGC GGCGGCCGCG AGCGCCGCCG CGGCCGCCGG TTTTCCCCAG GTATTCAACG TGCTGGAGGG TTTCGAGGGC GATCTCGATG CCCGTCAGCA ACGCGGCGAA AGCGGCGGCT GGCGACACTG GGGGCTGCCC TGGGTCCAGG ATTGA
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Protein sequence | MPAATPVRHE AAEDVRRPVD LSEVLAASPA ELLARARARG VDGGLAYAGS LYPPEAWALL QAGAAILVDV RSAEELKFVG RVPDTLHVAW QSGPTLIKNP RFLIELAGKA GRDKVLVLLC RSGKRSAAAA SAAAAAGFPQ VFNVLEGFEG DLDARQQRGE SGGWRHWGLP WVQD
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