Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_20450 |
Symbol | rplT |
ID | 7760971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2037019 |
End bp | 2037375 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643804941 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_002799223 |
Protein GI | 226944150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.834025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTG TCAAGCGTGG CGTCATCGCT CGTCGCCGTC ACAAGAAAAT CCTGAAACTC GCCAAGGGCT ACTACGGTGC GCGTTCCCGC GTATTCCGCG TCGCCAAGCA GGCAGTGATC AAGGCTGGCC AGTACGCCTA CCGTGACCGC CGTCAGCGCA AGCGTCAGTT TCGTGCCCTG TGGATCGCCC GTATCAATGC TGGTGCCCGT CAGAACGGTC TGTCCTACAG CCGTCTGATC GCCGGCCTGA AGAAGGCGAC CATTGAGATC GACCGCAAGG TTCTGTCCGA TCTGGCAGTG AACGAAAAAG CGGCGTTCGC CGCGATTGTC GAGAAGGCTA AAGCCGTCCT GGCTTGA
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Protein sequence | MARVKRGVIA RRRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQRKRQFRAL WIARINAGAR QNGLSYSRLI AGLKKATIEI DRKVLSDLAV NEKAAFAAIV EKAKAVLA
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