Gene Avin_20450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20450 
SymbolrplT 
ID7760971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2037019 
End bp2037375 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content60% 
IMG OID643804941 
Product50S ribosomal protein L20 
Protein accessionYP_002799223 
Protein GI226944150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.834025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTG TCAAGCGTGG CGTCATCGCT CGTCGCCGTC ACAAGAAAAT CCTGAAACTC 
GCCAAGGGCT ACTACGGTGC GCGTTCCCGC GTATTCCGCG TCGCCAAGCA GGCAGTGATC
AAGGCTGGCC AGTACGCCTA CCGTGACCGC CGTCAGCGCA AGCGTCAGTT TCGTGCCCTG
TGGATCGCCC GTATCAATGC TGGTGCCCGT CAGAACGGTC TGTCCTACAG CCGTCTGATC
GCCGGCCTGA AGAAGGCGAC CATTGAGATC GACCGCAAGG TTCTGTCCGA TCTGGCAGTG
AACGAAAAAG CGGCGTTCGC CGCGATTGTC GAGAAGGCTA AAGCCGTCCT GGCTTGA
 
Protein sequence
MARVKRGVIA RRRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQRKRQFRAL 
WIARINAGAR QNGLSYSRLI AGLKKATIEI DRKVLSDLAV NEKAAFAAIV EKAKAVLA