Gene Avin_19960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19960 
SymbolccoH 
ID7760926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1983648 
End bp1984151 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID643804894 
Productcytochrome c oxidase accessory protein CcoH 
Protein accessionYP_002799178 
Protein GI226944105 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.177196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCGA TAAACAGTGA AACCAGCCGC TGGTACAAGC AGTTCTGGGC TTGGTTCGTC 
ATCGCGATCC TCCTCTGCTC GGTGGTGCTG GGCACCAGCC TGCTGGTGAT TTCCATCCGC
GAGGCGGATA GCCTGGTGGT AGACAACTAC TATGATGCCG GCAAGGGAAT CAACACCTCG
CTGGAGCGAG AGCACCTCGC TCGCCGCCTG GGCGTGCAGG CCCGGCTCGA GCTCCATGAG
GCGGATGGTA TCGCCGAGAT TCGGCTGACC GGCAACAGCC ACCCCCAGCA ACTGGTGCTC
AACCTGATCT CGCCGACCCA GGAGGAGAAG GACCGCCGAA TCGTGCTGCA ACCGCAGACC
GGTGACCTCT ATCGGGGCCA GATGCAGGAT GCGGTGCAAG GACGCCGCTT CGTCGAGATC
CTCGGCCGGG AAGGCGAAAA GGATTGGCGC CTGTTCGAGG AGAAAACCCT CGAAACCGGC
GTCGCCCTCG AACTGGGCGA TTGA
 
Protein sequence
MHPINSETSR WYKQFWAWFV IAILLCSVVL GTSLLVISIR EADSLVVDNY YDAGKGINTS 
LEREHLARRL GVQARLELHE ADGIAEIRLT GNSHPQQLVL NLISPTQEEK DRRIVLQPQT
GDLYRGQMQD AVQGRRFVEI LGREGEKDWR LFEEKTLETG VALELGD