Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_18540 |
Symbol | |
ID | 7760788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1833651 |
End bp | 1834931 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643804752 |
Product | outer membrane efflux protein |
Protein accession | YP_002799041 |
Protein GI | 226943968 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.134625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCCAA GCAAAACCAA GAAATGGTTG CCCTGCGCCC TGCTGGTGCT GGCCGGCGGC GCTTCCTGGG CGCAGGCCGC GGAGCCGCGA TCCGCCACAG CCGGTGCCTT TTCGCTGAAG CAGGCGTTCG ATGCCGCCTG GGCTCGCCAG CCCGAAGCGC AGTCGCTGTC CACCCGTAAC GAGGCAGCCA GGGCGCGGCG CGAGGTCGCC GATGGCTGGC TCGCCGAGCC GGCGGCCCTG TCGTTGTCGA CCGAGGGCGA TCAACTCGAC GGTAACGACG GTAGCCGCGA GCACATCGTC GGCCTGTCGC TGCCGTTGTG GCTGCCCGGC GAGCGCTCGC GGATGGGGGC CGTGGCCGAC GCCGAGGCGC AGGCCACGAC GAGCGGCGCG CTGGCGGCGC AGTTGCGCAC GGCAGCGCAG GTCCGCGAAG TCTATTGGCA ATGGCAACGG GCTCGCGTGG AGCGGGATCT GGCCCGCGAG CGGCAGGCCA AGGCGCGGCA ACTGGCCGCG GATGTCGCCC GGCGGGTCGT GGCCGGAGAA CTGGCGCTGG CCGACCGTCA CCAGGCCGAG GGCGCCGCCG CCCTGGCCGA CATGGAGCTG ACCACGGCCG AGTCCGTGCT GGCCGGTGCC GCGCAGCGGT TGCGGACGCT GACCGGCATG CGTCCCGTGG AGGCCGCGTC GCCGCCGGAG CGGATCGTCG ACGGCGAACC GGAGCCCGCC GACAGCGAGG ATGCGCCTGC GCTGGAGGCC GCCCATCCCG CGCTGGCGGC ATTGCGCGCG CAGAGCGAGG TGGCACGCAG TTCGGCCGAA CTGGCGCGGG TGCAGACCCG CGCCAATCCC GAGTTGACCC TGTCGGCGAC GCGCGAGCGG GAGCGTTCGG GCGAATCCTA CGACCAGACC CTGCTGGTGG GCGTGCGCAT TCCGTTCGGC TCGGCGAGCC GCAACCGGGC CAAGCAGGCC AGCGCCCAGG CCGACGCCAT CGAGGCCGAG GTGCAGTGGC GCCTGGAGCG TGAGCGCGTG CTGGCCGACC TGGAGGCCGC CCGTCTGCGC CTCGACGCCG CCGTGGCGAA GGCCCGCGCC GCCGAGCAGC GCGCCCGGCT CGCCGAGGAG TCGCGCGGCT TCTTCGACAA ATCCTTCCGC CTTGGCGAAA CCGACCTGCC GACCCGCCTG CGCATCGAGC TGGAGGCGAG CGAGGCGCGC CGCCAGGCCG CCCTGGCCGG GCTCGACCGG ACGGCCGCCA CCTCCGACTT GCGCCAGGCC CTCGGCCTGC TGCCCGAATG A
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Protein sequence | MFPSKTKKWL PCALLVLAGG ASWAQAAEPR SATAGAFSLK QAFDAAWARQ PEAQSLSTRN EAARARREVA DGWLAEPAAL SLSTEGDQLD GNDGSREHIV GLSLPLWLPG ERSRMGAVAD AEAQATTSGA LAAQLRTAAQ VREVYWQWQR ARVERDLARE RQAKARQLAA DVARRVVAGE LALADRHQAE GAAALADMEL TTAESVLAGA AQRLRTLTGM RPVEAASPPE RIVDGEPEPA DSEDAPALEA AHPALAALRA QSEVARSSAE LARVQTRANP ELTLSATRER ERSGESYDQT LLVGVRIPFG SASRNRAKQA SAQADAIEAE VQWRLERERV LADLEAARLR LDAAVAKARA AEQRARLAEE SRGFFDKSFR LGETDLPTRL RIELEASEAR RQAALAGLDR TAATSDLRQA LGLLPE
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